RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 KCNK2O95069 426 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 UTS2O95399 124 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 NPIPA8P0DM63 369 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 GRNP28799 593 aaKnown RBP16.26■□□□□ 0.19
CLK4-211ENST00000522556 RNF144AP50876 292 aaPredicted RBP16.26■□□□□ 0.19
CLK4-211ENST00000522556 PRR5P85299 388 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 CRYZQ08257 329 aaKnown RBP16.26■□□□□ 0.19
CLK4-211ENST00000522556 SNTA1Q13424 505 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 SPDYE7PQ495Y7 208 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 ZNF585AQ6P3V2 769 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 OLIG3Q7RTU3 272 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 MARCH3Q86UD3 253 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 OR8J2Q8NGG1 315 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 OR5D16Q8NGK9 328 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 CEP70Q8NHQ1 597 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 TESCQ96BS2 214 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 PRPF18Q99633 342 aaKnown RBP16.26■□□□□ 0.19
CLK4-211ENST00000522556 KLHDC3Q9BQ90 382 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 VKORC1Q9BQB6 163 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 EBF4Q9BQW3 602 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 ARHGAP21Q5T5U3 1957 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 CACNA1CQ13936 2221 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 OR14I1A6ND48 311 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 E9PBE3 544 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 GMFGO60234 142 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 DIAPH2O60879 1101 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 ALOX5P09917 674 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 ELAVL4P26378 380 aaKnown RBP16.25■□□□□ 0.19
CLK4-211ENST00000522556 KIR3DL1P43629 444 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 ZFP36L2P47974 494 aaKnown RBP16.25■□□□□ 0.19
CLK4-211ENST00000522556 NUP107P57740 925 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 PLCZ1Q86YW0 608 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 LRRC34Q8IZ02 419 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 GOLGA6L1Q8N7Z2 621 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 COX18Q8N8Q8 333 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 GATSQ8NAP1 163 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 OR4A15Q8NGL6 344 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 OR9I1Q8NGQ6 314 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 OR4C3Q8NH37 302 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 FAM110BQ8TC76 370 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 LRRC8CQ8TDW0 803 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 CHMP6Q96FZ7 201 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 C7orf26Q96N11 449 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 TP63Q9H3D4 680 aaPredicted RBP16.25■□□□□ 0.19
CLK4-211ENST00000522556 NEUROD4Q9HD90 331 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 ACAD8Q9UKU7 415 aa16.25■□□□□ 0.19
CLK4-211ENST00000522556 RNF103-CHMP3A0A140T963 221 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 RNASET2O00584 256 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 BCKDKO14874 412 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 KCNH1O95259 989 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 CPSF4O95639 269 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 CDKN2CP42773 168 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 PRIM2P49643 509 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 LSM12Q3MHD2 195 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 ZNF787Q6DD87 383 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 CDC73Q6P1J9 531 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 SPATA19Q7Z5L4 167 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 OR56A1Q8NGH5 318 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 SFXN5Q8TD22 340 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 OR7D2Q96RA2 312 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 INPP5KQ9BT40 448 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 UGT2B28Q9BY64 529 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 OR2B2Q9GZK3 357 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 DSN1Q9H410 356 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 INTS9Q9NV88 658 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 FAM120CQ9NX05 1096 aaKnown RBP16.24■□□□□ 0.19
CLK4-211ENST00000522556 GIN1Q9NXP7 522 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 ALKBH4Q9NXW9 302 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 MED11Q9P086 117 aa16.24■□□□□ 0.19
CLK4-211ENST00000522556 SLCO1B7G3V0H7 640 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 OXSR1O95747 527 aaPredicted RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 DDX5P17844 614 aaKnown RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 BMP7P18075 431 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 ACVR2AP27037 513 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 PSPHP78330 225 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 VPS26BQ4G0F5 336 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 EPGNQ6UW88 154 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 PLXDC2Q6UX71 529 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 SEM1Q6ZVN7 128 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 CCDC71Q8IV32 467 aaPredicted RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 ZNF808Q8N4W9 903 aaPredicted RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 FADS6Q8N9I5 356 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 OR2M3Q8NG83 312 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 ACTRT2Q8TDY3 377 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 PHF10Q8WUB8 498 aaKnown RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 DYDC1Q8WWB3 177 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 SARAFQ96BY9 339 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 TIMP4Q99727 224 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 ACTRT3Q9BYD9 372 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 PIGUQ9H490 435 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 PPP4R1LQ9P1A2 415 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 ABCG2Q9UNQ0 655 aa16.23■□□□□ 0.19
CLK4-211ENST00000522556 RPH3AQ9Y2J0 694 aaPredicted RBP16.23■□□□□ 0.19
CLK4-211ENST00000522556 TTC36A6NLP5 189 aa16.22■□□□□ 0.19
CLK4-211ENST00000522556 C19orf84I3L1E1 186 aa16.22■□□□□ 0.19
CLK4-211ENST00000522556 GLI4P10075 376 aa16.22■□□□□ 0.19
CLK4-211ENST00000522556 CD1EP15812 388 aa16.22■□□□□ 0.19
CLK4-211ENST00000522556 S100A3P33764 101 aa16.22■□□□□ 0.19
CLK4-211ENST00000522556 ADH7P40394 386 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms