RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ZNF350Q9GZX5 532 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 SPACA6W5XKT8 324 aa23.99■■□□□ 1.43
COL13A1-213ENST00000520267 OR5K4A6NMS3 321 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 WWP2O00308 870 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 OR5F1O95221 314 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 CTSBP07858 339 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 CT62P0C5K7 136 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 GNSP15586 552 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 PTNP21246 168 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 ETV5P41161 510 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 ETV1P50549 477 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 SLC36A4Q6YBV0 504 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 NRMQ8IXM6 262 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 CNPPD1Q9BV87 410 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 CACYBPQ9HB71 228 aaKnown RBP23.98■■□□□ 1.43
COL13A1-213ENST00000520267 FAM60AQ9NP50 221 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 SLC7A7Q9UM01 511 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 MYL12BO14950 172 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 APOL3O95236 402 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 ALOX5P09917 674 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 ZNF136P52737 540 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 EXOSC7Q15024 291 aaKnown RBP23.98■■□□□ 1.43
COL13A1-213ENST00000520267 PRICKLE4Q2TBC4 344 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 DCST2Q5T1A1 773 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 GPR174Q9BXC1 333 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 ZNF576Q9H609 170 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 EXOSC4Q9NPD3 245 aaKnown RBP23.98■■□□□ 1.43
COL13A1-213ENST00000520267 QPCTLQ9NXS2 382 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 CARD8Q9Y2G2 431 aa23.98■■□□□ 1.43
COL13A1-213ENST00000520267 SGK494L7N484 410 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 IGLV3-19P01714 112 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 CTSEP14091 401 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 ENDOUP21128 410 aaKnown RBP23.97■■□□□ 1.43
COL13A1-213ENST00000520267 RNF144AP50876 292 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-213ENST00000520267 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.97■■□□□ 1.43
COL13A1-213ENST00000520267 MANEAQ5SRI9 462 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 OR4Q3Q8NH05 313 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 RACGAP1Q9H0H5 632 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 MAT2BQ9NZL9 334 aa23.97■■□□□ 1.43
COL13A1-213ENST00000520267 A0A087WV62 115 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 NPIPA5A0A0B4J1W7 369 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 OR5K3A6NET4 321 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 NPIPA7E9PJI5 369 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 KLF4O43474 513 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 PLOD3O60568 738 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 NPIPA8P0DM63 369 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 TGM1P22735 817 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 FPR3P25089 353 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 HHEXQ03014 270 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 MGAT2Q10469 447 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 DEFB110Q30KQ9 67 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 MBOAT2Q6ZWT7 520 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 GALNT12Q8IXK2 581 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 ZNF619Q8N2I2 560 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 TRMT61AQ96FX7 289 aaKnown RBP23.96■■□□□ 1.43
COL13A1-213ENST00000520267 SLC38A2Q96QD8 506 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 KCNE5Q9UJ90 142 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 TAF4O00268 1085 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 PRODHO43272 600 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 THBS1P07996 1170 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 PRG2P13727 222 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 ST6GAL1P15907 406 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 STAT5AP42229 794 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 CRYBB2P43320 205 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 KLHL22Q53GT1 634 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 OOSP2Q86WS3 158 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 POGLUT1Q8NBL1 392 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 ANKK1Q8NFD2 765 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 RNFT2Q96EX2 444 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 CCDC3Q9BQI4 270 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 GPR27Q9NS67 375 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 MRPS18AQ9NVS2 196 aaKnown RBP23.96■■□□□ 1.43
COL13A1-213ENST00000520267 C2orf42Q9NWW7 574 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 MTCH2Q9Y6C9 303 aa23.96■■□□□ 1.43
COL13A1-213ENST00000520267 STX11O75558 287 aa23.95■■□□□ 1.43
COL13A1-213ENST00000520267 CH25HO95992 272 aa23.95■■□□□ 1.43
COL13A1-213ENST00000520267 RPS4Y1P22090 263 aaKnown RBP23.95■■□□□ 1.43
COL13A1-213ENST00000520267 MLLT11Q13015 90 aaPredicted RBP23.95■■□□□ 1.43
COL13A1-213ENST00000520267 DNASE1L3Q13609 305 aa23.95■■□□□ 1.43
COL13A1-213ENST00000520267 SLC30A6Q6NXT4 461 aa23.95■■□□□ 1.43
COL13A1-213ENST00000520267 CDRT4Q8N9R6 151 aa23.95■■□□□ 1.43
COL13A1-213ENST00000520267 ANKRD9Q96BM1 317 aaPredicted RBP23.95■■□□□ 1.43
COL13A1-213ENST00000520267 PEX12O00623 359 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 SOX6P35712 828 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 C1DQ13901 141 aaKnown RBP23.95■■□□□ 1.42
COL13A1-213ENST00000520267 FLYWCH1Q4VC44 716 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 EIPR1Q53HC9 387 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 TUBA3EQ6PEY2 450 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 COX18Q8N8Q8 333 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 ASPNQ9BXN1 380 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 POLE4Q9NR33 117 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 DUSP22Q9NRW4 184 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 NDUFB11Q9NX14 153 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 SEC14L4Q9UDX3 406 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 CLCA2Q9UQC9 943 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 CFL2Q9Y281 166 aa23.95■■□□□ 1.42
COL13A1-213ENST00000520267 RDH16O75452 317 aa23.94■■□□□ 1.42
COL13A1-213ENST00000520267 GKN3PP0CG01 181 aa23.94■■□□□ 1.42
COL13A1-213ENST00000520267 S100A5P33763 92 aa23.94■■□□□ 1.42
COL13A1-213ENST00000520267 LIPKQ5VXJ0 399 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms