RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NTMT1Q9BV86 223 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 OSBPL11Q9BXB4 747 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ACTR6Q9GZN1 396 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 AICDAQ9GZX7 198 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 STMN4Q9H169 189 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 SPNS1Q9H2V7 528 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 GOLPH3Q9H4A6 298 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 NT5DC2Q9H857 520 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 RNF122Q9H9V4 155 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 PLSCR4Q9NRQ2 329 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TAS2R13Q9NYV9 303 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 TAS2R10Q9NYW0 307 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 KLRF1Q9NZS2 232 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ADAMTS6Q9UKP5 1117 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 BLOC1S6Q9UL45 172 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CFL2Q9Y281 166 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 MED16Q9Y2X0 877 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 NOSIPQ9Y314 301 aaKnown RBP4.38□□□□□ -1.71
SDCBP-207ENST00000520168 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
SDCBP-207ENST00000520168 CMYA5Q8N3K9 4069 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 A0A096LPE4 126 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 A0A0G2JN53 185 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 A0A1W2PPZ6 126 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 MAGEB16A2A368 324 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 H3BQF6 201 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 H7C417 338 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CLOCKO15516 846 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 IFNB1P01574 187 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 STMN1P16949 149 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CPN2P22792 545 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ABCD3P28288 659 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 BUD31P41223 144 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 FNTAP49354 379 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ARFIP1P53367 373 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 HNRNPH2P55795 449 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 IL2P60568 153 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 RPS3AP61247 264 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 HERVK_113P63132 956 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ERVK-8P63133 956 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 SIRPAP78324 504 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 PSPHP78330 225 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CRADDP78560 199 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CDKL1Q00532 357 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 DR1Q01658 176 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 FAPQ12884 760 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GANABQ14697 944 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 OASLQ15646 514 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 EXOC3L2Q2M3D2 409 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CYP27C1Q4G0S4 372 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 C6orf163Q5TEZ5 329 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 BICRALQ6AI39 1079 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 STAC2Q6ZMT1 411 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 C22orf34Q6ZV56 151 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 NUP54Q7Z3B4 507 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CROCCP2Q86T23 111 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 THOC6Q86W42 341 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GPSM1Q86YR5 675 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 PLCZ1Q86YW0 608 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 WFDC3Q8IUB2 231 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ARIH2OSQ8N7S6 290 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF610Q8N9Z0 462 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 DRAXINQ8NBI3 349 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 LILRB1Q8NHL6 650 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 RAB3IL1Q8TBN0 382 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 C10orf105Q8TEF2 133 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GRK7Q8WTQ7 553 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 EEF1AKMT1Q8WVE0 214 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 HSD17B8Q92506 261 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ALG3Q92685 438 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 KAT2AQ92830 837 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GCDHQ92947 438 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 RIT1Q92963 219 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 MAGOHBQ96A72 148 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 TMCO6Q96DC7 493 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GMPPAQ96IJ6 420 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 VPS39Q96JC1 886 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 SH3GL3Q99963 347 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ERP44Q9BS26 406 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ERVK-6Q9BXR3 956 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 VCX3BQ9H321 246 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 EHD1Q9H4M9 534 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 RPF2Q9H7B2 306 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 MYOZ1Q9NP98 299 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 PRDM7Q9NQW5 492 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GLRX2Q9NS18 164 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 SYBUQ9NX95 663 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 PAQR5Q9NXK6 330 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 CISD1Q9NZ45 108 aaKnown RBP4.37□□□□□ -1.71
SDCBP-207ENST00000520168 GPRC5BQ9NZH0 403 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 PHF11Q9UIL8 331 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 DKKL1Q9UK85 242 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 NFU1Q9UMS0 254 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 ERVK-19Q9WJR5 959 aa4.37□□□□□ -1.71
SDCBP-207ENST00000520168 LINC00854A0A1B0GVQ3 168 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TMEM89A2RUT3 159 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA6L10A6NI86 522 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms