RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 EXOSC7Q15024 291 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 P2RY14Q15391 338 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYTH1Q15438 398 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAF13Q15543 124 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAPRE2Q15555 327 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TGFBIQ15582 683 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1C1Q15619 314 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TPSAB1Q15661 275 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNCBQ16143 134 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 UAP1Q16222 522 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC15A2Q16348 729 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSG3Q16557 428 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CAMK4Q16566 473 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTF1Q16619 201 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDKN3Q16667 212 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 HAGHQ16775 308 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CA9Q16790 459 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 KNOP1Q1ED39 458 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUOXA1Q1HG43 343 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MICBQ29980 383 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 EIF2S3LQ2VIR3 472 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 C18orf21Q32NC0 220 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNAI3Q3KNW1 292 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF528Q3MIS6 628 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSDL1Q3SXM5 330 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF718Q3SXZ3 478 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MOGAT2Q3SYC2 334 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GLYR1Q49A26 553 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC14Q49A88 953 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR33Q49SQ1 333 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 VPS26BQ4G0F5 336 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 LINC01620Q4KN68 170 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SBK1Q52WX2 424 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM35AQ53FP2 167 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB6CQ53S08 254 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SFT2D3Q587I9 215 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF542PQ5EBM4 170 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 XKR4Q5GH76 650 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGD3Q5JSP0 725 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC35D3Q5M8T2 416 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ELFN2Q5R3F8 820 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIK3CD-AS1Q5SR53 167 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SAPCD1Q5SSQ6 148 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 FNBP1LQ5T0N5 605 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DCST2Q5T1A1 773 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 BEND3Q5T5X7 828 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GRTP1Q5TC63 336 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DDI2Q5TDH0 399 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDUFAF5Q5TEU4 345 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 AGBL2Q5U5Z8 902 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 AGAP7PQ5VUJ5 663 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 LIPKQ5VXJ0 399 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLPP4Q5VZY2 271 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 LIPJQ5W064 366 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 WSCD1Q658N2 575 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF776Q68DI1 518 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATL3Q6DD88 541 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 HIST2H2BCQ6DN03 193 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 HIST2H2BDQ6DRA6 164 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RTL6Q6ICC9 239 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2A2Q6IF42 318 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4A47Q6IF82 309 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCEAL6Q6IPX3 200 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC8B1Q6J4K2 584 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PYHIN1Q6K0P9 492 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRNP1Q6NT89 227 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 H3F3CQ6NXT2 135 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDC42EP5Q6NZY7 148 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC27A4Q6P1M0 643 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TTC27Q6P3X3 843 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 LEG1Q6P5S2 330 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM71Q6P5X7 295 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RFWD3Q6PCD5 774 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 BHLHB9Q6PI77 547 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNIP4Q6PIL6 250 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM220Q6QAJ8 160 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DHRS11Q6UWP2 260 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM184AQ6ZMB5 413 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF66Q6ZN08 573 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DPY19L2P2Q6ZN68 376 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF704Q6ZNC4 412 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF600Q6ZNG1 722 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RFPL4BQ6ZWI9 263 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 FRA10AC1Q70Z53 315 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q7L0L9 218 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASRGL1Q7L266 308 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDUFAF7Q7L592 441 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 COPS6Q7L5N1 327 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARCQ7LC44 396 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SHFQ7M4L6 423 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 H2BFWTQ7Z2G1 175 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DPY19L4Q7Z388 723 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 COX8CQ7Z4L0 72 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 P4HA3Q7Z4N8 544 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR142Q7Z601 462 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 NET1Q7Z628 596 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TFAP2DQ7Z6R9 452 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANKRD37Q7Z713 158 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MOB3BQ86TA1 216 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF554Q86TJ5 538 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms