RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CES4AQ5XG92 561 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 LURAP1LQ8IV03 231 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 FBXO30Q8TB52 745 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 ZPLD1Q8TCW7 415 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 DSN1Q9H410 356 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 ZNF395Q9H8N7 513 aaPredicted RBP22.24■■□□□ 1.15
SNF8-213ENST00000514929 ATAD3AQ9NVI7 634 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 NTMQ9P121 344 aa22.24■■□□□ 1.15
SNF8-213ENST00000514929 EIF3LQ9Y262 564 aaKnown RBP22.24■■□□□ 1.15
SNF8-213ENST00000514929 RPH3AQ9Y2J0 694 aaPredicted RBP22.24■■□□□ 1.15
SNF8-213ENST00000514929 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 A0A1W2PRB8 838 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 ENO4A6NNW6 628 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 PRR5P85299 388 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 MAD2L1Q13257 205 aaPredicted RBP22.23■■□□□ 1.15
SNF8-213ENST00000514929 MLC1Q15049 377 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 PDCD2Q16342 344 aaPredicted RBP22.23■■□□□ 1.15
SNF8-213ENST00000514929 CPTPQ5TA50 214 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 MARCH3Q86UD3 253 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 ZNF781Q8N8C0 355 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 OR2M3Q8NG83 312 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 HOXB13Q92826 284 aaPredicted RBP22.23■■□□□ 1.15
SNF8-213ENST00000514929 GIMAP5Q96F15 307 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 PRPF18Q99633 342 aaKnown RBP22.23■■□□□ 1.15
SNF8-213ENST00000514929 TBL1XR1Q9BZK7 514 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 CALHM2Q9HA72 323 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 ACTL7BQ9Y614 415 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 CREBBPQ92793 2442 aa22.23■■□□□ 1.15
SNF8-213ENST00000514929 B4DXG7 233 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 ZIC3O60481 467 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 UTS2O95399 124 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 DHRS4L1P0CG22 281 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 ACP2P11117 423 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 LAMP1P11279 417 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 MAP3K8P41279 467 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 STARP49675 285 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 TNFAIP8L3Q5GJ75 292 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 MFSD12Q6NUT3 480 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 FADS6Q8N9I5 356 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 SLC16A11Q8NCK7 471 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 DUSP19Q8WTR2 217 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 JADE3Q92613 823 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 PGM2Q96G03 612 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 TUBA1CQ9BQE3 449 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 PTGES2Q9H7Z7 377 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 SLC24A3Q9HC58 644 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 ZCCHC3Q9NUD5 404 aaKnown RBP22.22■■□□□ 1.15
SNF8-213ENST00000514929 MED11Q9P086 117 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 ZNF629Q9UEG4 869 aaPredicted RBP22.22■■□□□ 1.15
SNF8-213ENST00000514929 RAP2CQ9Y3L5 183 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 SNX8Q9Y5X2 465 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 MYO9AB2RTY4 2548 aa22.22■■□□□ 1.15
SNF8-213ENST00000514929 INTS1Q8N201 2190 aaKnown RBP22.22■■□□□ 1.15
SNF8-213ENST00000514929 MBD3L4A6NDZ8 208 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 MBD3L3A6NE82 208 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 MBD3L5A6NJ08 208 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 IGKV1D-16P01601 117 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 ALOX5P09917 674 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 PRPS1L1P21108 318 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 CHMP24386 653 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 SLC1A6P48664 564 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 PRIM2P49643 509 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 GRAMD1BQ3KR37 738 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 ZCCHC12Q6PEW1 402 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 GALNT10Q86SR1 603 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 KRTCAP2Q8N6L1 136 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 NATD1Q8N6N6 113 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 RELL2Q8NC24 303 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 MBD3L2Q8NHZ7 208 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 OR5P2Q8WZ92 322 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 FAM120BQ96EK7 910 aaKnown RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 LRRC46Q96FV0 321 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 CHMP6Q96FZ7 201 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 C16orf58Q96GQ5 468 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 PPP1R36Q96LQ0 422 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 YIPF4Q9BSR8 244 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 RTN4RQ9BZR6 473 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 MCCC2Q9HCC0 563 aa22.21■■□□□ 1.15
SNF8-213ENST00000514929 SIRT3Q9NTG7 399 aaPredicted RBP22.21■■□□□ 1.15
SNF8-213ENST00000514929 SNUPNO95149 360 aaKnown RBP22.2■■□□□ 1.14
SNF8-213ENST00000514929 G6PDP11413 515 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 HK1P19367 917 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 BGNP21810 368 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 LHX2P50458 406 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 ZNF136P52737 540 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 DGKQP52824 942 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 EMX2Q04743 252 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 MYBPHQ13203 477 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 MPP2Q14168 576 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 GANABQ14697 944 aaKnown RBP22.2■■□□□ 1.14
SNF8-213ENST00000514929 DUSP5Q16690 384 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 RAET1LQ5VY80 246 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 FIGNL1Q6PIW4 674 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 COX18Q8N8Q8 333 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 OTUB1Q96FW1 271 aaPredicted RBP22.2■■□□□ 1.14
SNF8-213ENST00000514929 PAIP2Q9BPZ3 127 aaKnown RBP22.2■■□□□ 1.14
SNF8-213ENST00000514929 ZNF559Q9BR84 538 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 NOP53Q9NZM5 478 aaKnown RBP22.2■■□□□ 1.14
SNF8-213ENST00000514929 KCNN3Q9UGI6 736 aa22.2■■□□□ 1.14
SNF8-213ENST00000514929 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms