RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 OPN1LWP04000 364 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 MAPK12P53778 367 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 PNLIPRP2P54317 469 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 MRPS22P82650 360 aaKnown RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 FRG1Q14331 258 aaKnown RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 STK11Q15831 433 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 CCNYL2Q5T2Q4 361 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 SFRP5Q5T4F7 317 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 LIPJQ5W064 366 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 TFAP2EQ6VUC0 442 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 GALNT10Q86SR1 603 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 SLC44A2Q8IWA5 706 aaPredicted RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 OR4N2Q8NGD1 307 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 GRK7Q8WTQ7 553 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 PROX1Q92786 737 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 C3orf49Q96BT1 292 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 NXNL1Q96CM4 212 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 ZMYND19Q96E35 227 aaPredicted RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 VSTM2LQ96N03 204 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 MCMBPQ9BTE3 642 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 MRPL1Q9BYD6 325 aaKnown RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 RTN4RQ9BZR6 473 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 DDX47Q9H0S4 455 aaKnown RBP9.32□□□□□ -0.92
CLDND1-227ENST00000513452 SAYSD1Q9NPB0 183 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 LZTFL1Q9NQ48 299 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 PFDN4Q9NQP4 134 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 SDHAF3Q9NRP4 125 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 GLRX2Q9NS18 164 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 CBLN4Q9NTU7 201 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 FLRT3Q9NZU0 649 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 VDAC3Q9Y277 283 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 OR10H1Q9Y4A9 318 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 PCDHA9Q9Y5H5 950 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 TEX264Q9Y6I9 313 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 CADP27708 2225 aa9.32□□□□□ -0.92
CLDND1-227ENST00000513452 C1orf226A1L170 272 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 FOXE1O00358 373 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ABCD4O14678 606 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 TNFSF11O14788 317 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 LY6HO94772 140 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 CSF3P09919 207 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 APEHP13798 732 aaKnown RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 STMN1P16949 149 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 TTKP33981 857 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ALDH9A1P49189 494 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ERCC6LQ2NKX8 1250 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 TMEM44Q2T9K0 475 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 GLYR1Q49A26 553 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 BHLHA15Q7RTS1 189 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 PPM1NQ8N819 430 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 SGMS2Q8NHU3 365 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 STAG3L4Q8TBR4 150 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 WDR20Q8TBZ3 569 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 DUSP19Q8WTR2 217 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 CNRIP1Q96F85 164 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 HBEGFQ99075 208 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 SERPINI1Q99574 410 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 PRR14Q9BWN1 585 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 TMEM185BQ9H7F4 350 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 PAQR5Q9NXK6 330 aaPredicted RBP9.31□□□□□ -0.92
CLDND1-227ENST00000513452 NSMCE4AQ9NXX6 385 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 STOML1Q9UBI4 398 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ADAM29Q9UKF5 820 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ABCG2Q9UNQ0 655 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 RNF11Q9Y3C5 154 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ZNF780BQ9Y6R6 833 aa9.31□□□□□ -0.92
CLDND1-227ENST00000513452 ESYT3A0FGR9 886 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 H7C417 338 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 FADS1O60427 444 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 KERAO60938 352 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 GUCY1B2O75343 617 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ADAP00813 363 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 TGFAP01135 160 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ARL1P40616 181 aaPredicted RBP9.3□□□□□ -0.92
CLDND1-227ENST00000513452 FNTAP49354 379 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 PSPHP78330 225 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ZNF155Q12901 538 aaPredicted RBP9.3□□□□□ -0.92
CLDND1-227ENST00000513452 P2RY6Q15077 328 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 PPA1Q15181 289 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ZNF628Q5EBL2 1059 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 TMEM201Q5SNT2 666 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 SH2D4BQ5SQS7 431 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 PAGE2Q7Z2X7 111 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 NUFIP2Q7Z417 695 aaKnown RBP9.3□□□□□ -0.92
CLDND1-227ENST00000513452 MARCH3Q86UD3 253 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 EXOC3L1Q86VI1 746 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 WDR75Q8IWA0 830 aaKnown RBP9.3□□□□□ -0.92
CLDND1-227ENST00000513452 FBXL14Q8N1E6 418 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 MUC15Q8N387 334 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 C3orf56Q8N813 242 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 FBXO36Q8NEA4 188 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 TRIM58Q8NG06 486 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 OR9A2Q8NGT5 310 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 OR2V1Q8NHB1 315 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ZNF675Q8TD23 568 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 ABHD3Q8WU67 409 aa9.3□□□□□ -0.92
CLDND1-227ENST00000513452 KAT2AQ92830 837 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms