RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 EMDP50402 254 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 IRX1P78414 480 aaPredicted RBP10.31□□□□□ -0.76
RNF4-216ENST00000511859 POU4F1Q01851 419 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 BSPH1Q075Z2 132 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 EXOSC7Q15024 291 aaKnown RBP10.31□□□□□ -0.76
RNF4-216ENST00000511859 OR4D1Q15615 310 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 TAB1Q15750 504 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.31□□□□□ -0.76
RNF4-216ENST00000511859 FAM153CQ494X1 144 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 FIGNL1Q6PIW4 674 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 KBTBD8Q8NFY9 601 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 OR2M3Q8NG83 312 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 OR52B6Q8NGF0 335 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 OR52R1Q8NGF1 315 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 PYROXD1Q8WU10 500 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 FBXO34Q9NWN3 711 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 MOCS1Q9NZB8 636 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 OPTCQ9UBM4 332 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 PSME2Q9UL46 239 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 MCTS1Q9ULC4 181 aaKnown RBP10.31□□□□□ -0.76
RNF4-216ENST00000511859 CLEC4AQ9UMR7 237 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 LOC100289279A0A1B0GTE1 492 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 DPRXA6NFQ7 191 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 GUCY1B2O75343 617 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 GCM2O75603 506 aaPredicted RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 GBAP04062 536 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 CSF3P09919 207 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 CSNK2A2P19784 350 aaPredicted RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 IL32P24001 234 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 MAGEA4P43358 317 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 EIF1AXP47813 144 aaKnown RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 SLC6A8P48029 635 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 VSNL1P62760 191 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 MGAT5Q09328 741 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 TRMT12Q53H54 448 aaKnown RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 SFRP5Q5T4F7 317 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 STEAP4Q687X5 459 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 PPP4R4Q6NUP7 873 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 IL17RELQ6ZVW7 336 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
RNF4-216ENST00000511859 MYLK4Q86YV6 388 aaPredicted RBP10.3□□□□□ -0.76
RNF4-216ENST00000511859 OR5M1Q8NGP8 315 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 STAG3L4Q8TBR4 150 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 RADILQ96JH8 1075 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 BTBD9Q96Q07 612 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 CACNG6Q9BXT2 260 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 FOLH1BQ9HBA9 442 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 ZBTB26Q9HCK0 441 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 SMYD2Q9NRG4 433 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 NSMCE4AQ9NXX6 385 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 MED11Q9P086 117 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 XPR1Q9UBH6 696 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 CES1P1Q9UKY3 287 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 TRRAPQ9Y4A5 3859 aa10.3□□□□□ -0.76
RNF4-216ENST00000511859 C1orf226A1L170 272 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SLC35F4A4IF30 521 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 UGDHO60701 494 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 PIAS1O75925 651 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SEMA3DO95025 777 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 TUBBP07437 444 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 CT45A8P0DMV1 189 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 CT45A9P0DMV2 189 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 EGR1P18146 543 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SSTR1P30872 391 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
RNF4-216ENST00000511859 GPX6P59796 221 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 CT45A2Q5DJT8 189 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SLC48A1Q6P1K1 146 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SSX8Q7RTT4 187 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 GABRG1Q8N1C3 465 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 ZNF525Q8N782 197 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 UHMK1Q8TAS1 419 aaKnown RBP10.29□□□□□ -0.76
RNF4-216ENST00000511859 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 TRPC4APQ8TEL6 797 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 LRRC39Q96DD0 335 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 TSPAN17Q96FV3 270 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 UBXN10Q96LJ8 280 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SERPINI1Q99574 410 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 MCMBPQ9BTE3 642 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 PARD6BQ9BYG5 372 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 C12orf65Q9H3J6 166 aaKnown RBP10.29□□□□□ -0.76
RNF4-216ENST00000511859 MANSC1Q9H8J5 431 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 CBLN4Q9NTU7 201 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 AHSPQ9NZD4 102 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 ADAM29Q9UKF5 820 aa10.29□□□□□ -0.76
RNF4-216ENST00000511859 SHISA9B4DS77 424 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 EIF1AYO14602 144 aaKnown RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 EIF3HO15372 352 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNF4-216ENST00000511859 RAMP1O60894 148 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 ERAL1O75616 437 aaKnown RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 SYNGR4O95473 234 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 KLK1P06870 262 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
RNF4-216ENST00000511859 TTKP33981 857 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 EVI2BP34910 448 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 C21orf58P58505 322 aa10.28□□□□□ -0.76
RNF4-216ENST00000511859 ITGADQ13349 1161 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms