RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 USP17L11C9JVI0 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L18D6R9N7 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L22D6RA61 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L17D6RBQ6 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L19D6RCP7 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L20D6RJB6 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SLC1A7O00341 560 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 GABRDO14764 452 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 DEGS1O15121 323 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PMM2O15305 246 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SLC7A4O43246 635 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PDE8BO95263 885 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SIX6O95475 246 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 IGSF6O95976 241 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ALDOBP05062 364 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PTHLHP12272 177 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TGM1P22735 817 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 GABRR1P24046 479 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PRKCHP24723 683 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 MGAT1P26572 445 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ADORA2AP29274 412 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SSTR1P30872 391 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 HTR3AP46098 478 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 CRKLP46109 303 aaKnown RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 FCGRTP55899 365 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TAS2R60P59551 318 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UBE2IP63279 158 aaKnown RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 USP17L24Q0WX57 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TCEAL1Q15170 157 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 HSPB2Q16082 182 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ZNF74Q16587 644 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UBE2NLQ5JXB2 153 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 CST9Q5W186 159 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 FAM205BPQ63HN1 556 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 VASNQ6EMK4 673 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 NADSYN1Q6IA69 706 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TSSK4Q6SA08 328 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 EPGNQ6UW88 154 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UNQ6126/PRO20091Q6UXV3 157 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UNC5DQ6UXZ4 953 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ZNF571Q7Z3V5 609 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 NPAS4Q8IUM7 802 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 LRRC56Q8IYG6 542 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 PGBD5Q8N414 524 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 RNF148Q8N7C7 305 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 OR5H2Q8NGV7 314 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 DYNC2LI1Q8TCX1 351 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 C16orf78Q8WTQ4 265 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UBTD2Q8WUN7 234 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TVP23CQ96ET8 276 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SORCS2Q96PQ0 1159 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 NELL2Q99435 816 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TCF25Q9BQ70 676 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PTDSS2Q9BVG9 487 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 LACRTQ9GZZ8 138 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SDCBP2Q9H190 292 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 FBXO44Q9H4M3 255 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SLC32A1Q9H598 525 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TMEM231Q9H6L2 316 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ZNF552Q9H707 407 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 EXOSC3Q9NQT5 275 aaKnown RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 GPR173Q9NS66 373 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PLEK2Q9NYT0 353 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 DPP7Q9UHL4 492 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 PADI1Q9ULC6 663 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 OAZ3Q9UMX2 235 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 PCDHGA7Q9Y5G6 932 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 RAI2Q9Y5P3 530 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 NDUFB9Q9Y6M9 179 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SBF1O95248 1867 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 BCORQ6W2J9 1755 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 LOC390937A0A1W2PQ73 354 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 FAM155AB1AL88 458 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 ZNF814B7Z6K7 855 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TMEM262E9PQX1 116 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TSPAN3O60637 253 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 UBL3O95164 117 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 RECKO95980 971 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 OR5G3P0C626 314 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 OR4E1P0C645 316 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TXNP10599 105 aaKnown RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 G6PDP11413 515 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 ALAS1P13196 640 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 CCR7P32248 378 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 IL6STP40189 918 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 PRRX1P54821 245 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SP4Q02446 784 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 TLE1Q04724 770 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 RCAN2Q14206 197 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 KCNJ11Q14654 390 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 HLXQ14774 488 aaPredicted RBP3.4□□□□□ -1.87
USP53-205ENST00000509769 GOLGA7BQ2TAP0 167 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 INAVAQ3KP66 663 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 THEM4Q5T1C6 240 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 GPR157Q5UAW9 335 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 KIAA1211LQ6NV74 962 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 LEG1Q6P5S2 330 aa3.4□□□□□ -1.87
USP53-205ENST00000509769 SV2AQ7L0J3 742 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms