RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 MIOXQ9UGB7 285 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LCMT1Q9UIC8 334 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PILRAQ9UKJ1 303 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ELF5Q9UKW6 265 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ZNF346Q9UL40 294 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 FZR1Q9UM11 496 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SATB2Q9UPW6 733 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 NIP7Q9Y221 180 aaKnown RBP eCLIP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ATG4BQ9Y4P1 393 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SELENOKQ9Y6D0 94 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RNF215Q9Y6U7 377 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 R4GN57 208 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TDRD15B5MCY1 1934 aaKnown RBP2.09□□□□□ -2.08
DEPDC1B-204ENST00000509006 BTBD17A6NE02 478 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SHISA7A6NL88 538 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 LRRC30A6NM36 301 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TMCO5BA8MYB1 307 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF732B4DXR9 585 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BLOC1S5-TXNDC5H3BN57 136 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 PSMD11O00231 422 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 HIP1O00291 1037 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC1A7O00341 560 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SDHDO14521 159 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 GLRA3O75311 464 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 LRATO95237 230 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 FGF19O95750 216 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CSTAP01040 98 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 MT-ND2P03891 347 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SERPIND1P05546 499 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 FCER2P06734 321 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TPM3P06753 285 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CRYGBP07316 175 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 STAG3L2P0CL84 134 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CD59P13987 128 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ACADSP16219 412 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 NT5EP21589 574 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 AADACP22760 399 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CHMLP26374 656 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 HMOX2P30519 316 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ALDH1B1P30837 517 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CASP14P31944 242 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 UGT1A5P35504 534 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CRYBB2P43320 205 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR1G1P47890 313 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 HTR5AP47898 357 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 RFX3P48380 749 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CLDN8P56748 225 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC8A3P57103 927 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ISL1P61371 349 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 YWHAEP62258 255 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 NTHL1P78549 312 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 MRPS6P82932 125 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BST2Q10589 180 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TAF10Q12962 218 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TRDNQ13061 729 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 HNRNPA1L2Q32P51 320 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BEX5Q5H9J7 111 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 C10orf120Q5SQS8 335 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BEND6Q5SZJ8 279 aaPredicted RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 PDSS1Q5T2R2 415 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BEND3Q5T5X7 828 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 LIN9Q5TKA1 542 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 PDPK2PQ6A1A2 396 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 DMKNQ6E0U4 476 aaPredicted RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 RNASEKQ6P5S7 137 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 KCNIP4Q6PIL6 250 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CORO6Q6QEF8 472 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SCARA5Q6ZMJ2 495 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 Q6ZRG5 221 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ASB18Q6ZVZ8 466 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 STXBP4Q6ZWJ1 553 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC24A5Q71RS6 500 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 H2BFWTQ7Z2G1 175 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 MOB3BQ86TA1 216 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 WDR49Q8IV35 697 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 LINC00518Q8N0U6 118 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 EID3Q8N140 333 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 PARP8Q8N3A8 854 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TEX26Q8N6G2 289 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR10A7Q8NGE5 316 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR4D10Q8NGI6 311 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 LILRB4Q8NHJ6 448 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 C8orf46Q8TAG6 207 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 GPX8Q8TED1 209 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 TMEM190Q8WZ59 177 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 PIGCQ92535 297 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SUSD6Q92537 303 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 STMN2Q93045 179 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC35C1Q96A29 364 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 UPRTQ96BW1 309 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 EFHD2Q96C19 240 aaPredicted RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 MRPL53Q96EL3 112 aaKnown RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ARL5BQ96KC2 179 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 ART5Q96L15 291 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 C4orf45Q96LM5 186 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CASD1Q96PB1 797 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCNL2Q96S94 520 aaPredicted RBP2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCDC3Q9BQI4 270 aa2.08□□□□□ -2.08
DEPDC1B-204ENST00000509006 BPIFA3Q9BQP9 254 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms