RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TCP10Q12799 353 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 HEPACAMQ14CZ8 416 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 MICAQ29983 383 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 SHROOM1Q2M3G4 852 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 VSIG1Q86XK7 387 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 LAX1Q8IWV1 398 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 THEM5Q8N1Q8 247 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 FAF2Q96CS3 445 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 VSIG2Q96IQ7 327 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 PANX3Q96QZ0 392 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 PTPN13Q12923 2485 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 TEP1Q99973 2627 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 MYO7AQ13402 2215 aa3.54□□□□□ -1.84
TOPBP1-206ENST00000508524 GAKO14976 1311 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 FAM149AA5PLN7 773 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 MEI4A8MW99 385 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 GPAA1O43292 621 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 CNMDO75829 334 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 GJB5O95377 273 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 IGKV5-2P06315 115 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 CA3P07451 260 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 SNRPCP09234 159 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 NUDT17P0C025 328 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 SBK2P0C263 348 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 SLC35E2P0CK97 266 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 LAMP1P11279 417 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 GYG1P46976 350 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 NFE2L1Q14494 772 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 PAN3Q58A45 887 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 NHSL2Q5HYW2 709 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 RHBDD2Q6NTF9 364 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 GPR142Q7Z601 462 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 NUP93Q8N1F7 819 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 FBXO25Q8TCJ0 367 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 RNF41Q9H4P4 317 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 UBE2ZQ9H832 354 aaPredicted RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 ADGRL4Q9HBW9 690 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 TIGARQ9NQ88 270 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 DNAJC17Q9NVM6 304 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 PRODH2Q9UF12 536 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 CIDEBQ9UHD4 219 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 KNSTRNQ9Y448 316 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 TEX15Q9BXT5 2789 aa3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 ANKRD17O75179 2603 aaKnown RBP3.53□□□□□ -1.84
TOPBP1-206ENST00000508524 RFX7Q2KHR2 1363 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 DOCK1Q14185 1865 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 FRG2CA6NGY1 282 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 EFCAB7A8K855 629 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 TSPAN2O60636 221 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 DUSP14O95147 198 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 GOT2P00505 430 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 TIMP1P01033 207 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 CT45A8P0DMV1 189 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 CT45A9P0DMV2 189 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 TKTL1P51854 596 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 SLC10A1Q14973 349 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 CT45A2Q5DJT8 189 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 CDC42EP5Q6NZY7 148 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 TUSC5Q8IXB3 177 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 RELL2Q8NC24 303 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 FAM151AQ8WW52 585 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 ARNTL2Q8WYA1 636 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 AP2M1Q96CW1 435 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 ZNF285Q96NJ3 590 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 PLEKHF1Q96S99 279 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 ABCG2Q9UNQ0 655 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 ATG4BQ9Y4P1 393 aa3.52□□□□□ -1.85
TOPBP1-206ENST00000508524 LAMA5O15230 3695 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 TTI1O43156 1089 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 STBD1O95210 358 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 PGK1P00558 417 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 UCP1P25874 307 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 BFSP1Q12934 665 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 SPP2Q13103 211 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 MEP1BQ16820 701 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ANKRD20A4Q4UJ75 823 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ANKRD20A8PQ5CZ79 823 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ANKRD20A2Q5SQ80 823 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 SEL1L2Q5TEA6 688 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ANKRD20A1Q5TYW2 823 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ANKRD20A3Q5VUR7 823 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 KHDRBS2Q5VWX1 349 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 HOOK3Q86VS8 718 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 TEKT1Q969V4 418 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 BIRC7Q96CA5 298 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ZMAT2Q96NC0 199 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 CASD1Q96PB1 797 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 DNAJC11Q9NVH1 559 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 CWC25Q9NXE8 425 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 RAI14Q9P0K7 980 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 KCNK6Q9Y257 313 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 ZNF462Q96JM2 2506 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 DOCK2Q92608 1830 aa3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 CNOT1A5YKK6 2376 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-206ENST00000508524 MYH3P11055 1940 aa3.5□□□□□ -1.85
TOPBP1-206ENST00000508524 TMEM129A0AVI4 362 aa3.5□□□□□ -1.85
TOPBP1-206ENST00000508524 TRABD2BA6NFA1 517 aa3.5□□□□□ -1.85
TOPBP1-206ENST00000508524 ZFP92A6NM28 416 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms