RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	COX18	Q8N8Q8	333 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	SLC16A11	Q8NCK7	471 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	OR4A15	Q8NGL6	344 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PSMA8	Q8TAA3	256 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	NEIL3	Q8TAT5	605 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ACTRT2	Q8TDY3	377 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ADAMTS15	Q8TE58	950 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PHF10	Q8WUB8	498 aa	Known RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	NUDT8	Q8WV74	236 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PIK3R3	Q92569	461 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	HOXB13	Q92826	284 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	TESC	Q96BS2	214 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	SARAF	Q96BY9	339 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	NTNG2	Q96CW9	530 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	GIMAP5	Q96F15	307 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	CHMP6	Q96FZ7	201 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	RMND5B	Q96G75	393 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	CCDC120	Q96HB5	630 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	MAGEB18	Q96M61	343 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	C7orf26	Q96N11	449 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	GNRHR2	Q96P88	292 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PSMG3-AS1	Q96PY0	264 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	STAC	Q99469	402 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ZBTB18	Q99592	522 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	VKORC1	Q9BQB6	163 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ACTRT3	Q9BYD9	372 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	SLC6A15	Q9H2J7	730 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	UBQLN3	Q9H347	655 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	CXorf36	Q9H7Y0	433 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	HHATL	Q9HCP6	504 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	GALNT9	Q9HCQ5	603 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	SDHAF3	Q9NRP4	125 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	AIG1	Q9NVV5	245 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	FAM120C	Q9NX05	1096 aa	Known RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PPP4R1L	Q9P1A2	415 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ACAD8	Q9UKU7	415 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	FAF1	Q9UNN5	650 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	ABCG2	Q9UNQ0	655 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	C15orf41	Q9Y2V0	281 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	MEMO1	Q9Y316	297 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	WIF1	Q9Y5W5	379 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	USH1C	Q9Y6N9	552 aa		4.59	□□□□□ -1.67
SNHG4-205	ENST00000507692	POLQ	O75417	2590 aa		4.59	□□□□□ -1.68
SNHG4-205	ENST00000507692	YLPM1	P49750	1951 aa	Known RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	RNF103-CHMP3	A0A140T963	221 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	PRSS51	A0A1B0GVH4	220 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692		A1L4Q6	167 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	C2orf72	A6NCS6	295 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	DUXA	A6NLW8	204 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF195	O14628	629 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ANKRD28	O15084	1053 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	UBD	O15205	165 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	POLR3G	O15318	223 aa	Predicted RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	SCO2	O43819	266 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	FADS1	O60427	444 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	SASH3	O75995	380 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	KCNK2	O95069	426 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	UTS2	O95399	124 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	TGDS	O95455	350 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	CPSF4	O95639	269 aa	Known RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	HOXD4	P09016	255 aa	Predicted RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GABRA1	P14867	456 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	HPGD	P15428	266 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	AGA	P20933	346 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ENDOU	P21128	410 aa	Known RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ATP6V1C1	P21283	382 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	MATN1	P21941	496 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	UQCRC2	P22695	453 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ACVR2A	P27037	513 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	LCN1	P31025	176 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GCK	P35557	465 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	TRPC1	P48995	793 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GAS1	P54826	345 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	NME5	P56597	212 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	WNT3	P56703	355 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	UFM1	P61960	85 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ADORA2A-AS1	P86434	159 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	C17orf67	Q0P5P2	114 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	LRRC74A	Q0VAA2	488 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GANAB	Q14697	944 aa	Known RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.58	□□□□□ -1.68	2e-41	■■□□□ 12.2
SNHG4-205	ENST00000507692	DUSP5	Q16690	384 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GSTA3	Q16772	222 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GRAMD1B	Q3KR37	738 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	FAM174B	Q3ZCQ3	159 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	GXYLT1	Q4G148	440 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC9B1	Q4ZJI4	515 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	PDCD4	Q53EL6	469 aa	Known RBP	4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	EMC4	Q5J8M3	183 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	SPANXN4	Q5MJ08	99 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	OR5M10	Q6IEU7	315 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF585A	Q6P3V2	769 aa		4.58	□□□□□ -1.68
SNHG4-205	ENST00000507692	FIGNL1	Q6PIW4	674 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms