RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DHDDSQ86SQ9 333 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 KRT73Q86Y46 540 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CLECL1Q8IZS7 167 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 FAM109AQ8N4B1 249 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF321PQ8N8H1 164 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SLC16A11Q8NCK7 471 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 GALNT11Q8NCW6 608 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 OR9I1Q8NGQ6 314 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 FAR1Q8WVX9 515 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 NR4A3Q92570 626 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SLC9A6Q92581 669 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 TMBIM1Q969X1 311 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 RNF31Q96EP0 1072 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ANKRD27Q96NW4 1050 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 OR7D2Q96RA2 312 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 SDF2Q99470 211 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CGREF1Q99674 301 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 CCDC106Q9BWC9 280 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 OSBPL11Q9BXB4 747 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 C1orf21Q9H246 121 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PTGES2Q9H7Z7 377 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 METTL7AQ9H8H3 244 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 ZDHHC11Q9H8X9 412 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 EXOSC3Q9NQT5 275 aaKnown RBP7.77□□□□□ -1.17
PDGFC-205ENST00000506880 PCDHB14Q9Y5E9 798 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 WIF1Q9Y5W5 379 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 MYO18BQ8IUG5 2567 aa7.77□□□□□ -1.17
PDGFC-205ENST00000506880 HIVEP3Q5T1R4 2406 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 A0A1B0GVC2 190 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 FAM47E-STBD1D6RA91 191 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 NPIPB9F8W1W9 429 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 PEX1O43933 1283 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 KIAA0513O60268 411 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 FADS1O60427 444 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SERPINB7O75635 380 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ATP5HO75947 161 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 CPSF4O95639 269 aaKnown RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 IFNA14P01570 189 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DBIP07108 87 aaKnown RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ACP2P11117 423 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 UQCRBP14927 111 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF24P17028 368 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 EIF1P41567 113 aaKnown RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SLC6A8P48029 635 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 RASSF2P50749 326 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 PRKAG1P54619 331 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DLX5P56178 289 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DSTNP60981 165 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 NFYCQ13952 458 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DUSP5Q16690 384 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 PLEKHN1Q494U1 663 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 EIPR1Q53HC9 387 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 RUNDC3AQ59EK9 446 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 NHSL2Q5HYW2 709 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 TIGD3Q6B0B8 471 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 MTFR2Q6P444 385 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SZRD1Q7Z422 152 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 MTDHQ86UE4 582 aaKnown RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ATCAYQ86WG3 371 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 GRAMD2AQ8IUY3 354 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 PEX5LQ8IYB4 626 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF619Q8N2I2 560 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 C11orf65Q8NCR3 313 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ST6GALNAC3Q8NDV1 305 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 OR2M7Q8NG81 312 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 BBS10Q8TAM1 723 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 JADE3Q92613 823 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZBTB9Q96C00 473 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 LRRC58Q96CX6 371 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 CRELD1Q96HD1 420 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 RNF145Q96MT1 663 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF607Q96SK3 696 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SLX1AQ9BQ83 275 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DOHHQ9BU89 302 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 TBL1XR1Q9BZK7 514 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 MAP10Q9P2G4 905 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DTX4Q9Y2E6 619 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 WDR45Q9Y484 360 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.76□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF462Q96JM2 2506 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 DSPPQ9NZW4 1301 aa7.76□□□□□ -1.17
PDGFC-205ENST00000506880 HEATR5AQ86XA9 2040 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ETV2O00321 342 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-205ENST00000506880 HMGN4O00479 90 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 MRASO14807 208 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 UGT2B11O75310 529 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 TNFRSF21O75509 655 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 UTS2O95399 124 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ACTL6AO96019 429 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 PDGFAP04085 211 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 HPNP05981 417 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 C8BP07358 591 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ARAFP10398 606 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 COX4I1P13073 169 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF17P17021 662 aa7.75□□□□□ -1.17
PDGFC-205ENST00000506880 RPS4Y1P22090 263 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms