RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CENPUQ71F23 418 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 FAM131BQ86XD5 332 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCDC36Q8IYA8 594 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 CENPSQ8N2Z9 138 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PCNPQ8WW12 178 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF606Q8WXB4 792 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF501Q96CX3 271 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 FBXO17Q96EF6 278 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 CNRIP1Q96F85 164 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 VPS35Q96QK1 796 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 TSPAN18Q96SJ8 248 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SYT15Q9BQS2 421 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 LRRCC1Q9C099 1032 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 RAB33BQ9H082 229 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 RMND5AQ9H871 391 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SDF2L1Q9HCN8 221 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRPV5Q9NQA5 729 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 IKZF3Q9UKT9 509 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC9A8Q9Y2E8 581 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 MRPS7Q9Y2R9 242 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PYGO1Q9Y3Y4 419 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 DDX49Q9Y6V7 483 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 A0A1B0GUL6 1792 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 MROH5Q6ZUA9 1318 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LOC105371242A0A075B767 164 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RNF222A6NCQ9 220 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 PDHXO00330 501 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 EI24O14681 340 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 MAGEB3O15480 346 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 TBX19O60806 448 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF432O94892 652 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 CLDN1O95832 211 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 AMBPP02760 352 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCL5P13501 91 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 TSPAN8P19075 237 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 DRD5P21918 477 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 OTX2P32243 289 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC1A6P48664 564 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 NDST2P52849 883 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 PEX3P56589 373 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 FKBP1AP62942 108 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPS27AP62979 156 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 NUCB2P80303 420 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 PPIL2Q13356 520 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF177Q13360 481 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ENPP2Q13822 863 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 EXOSC2Q13868 293 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 KIAA0141Q14154 515 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 FASTKQ14296 549 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZKSCAN8Q15776 578 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ECSCRQ19T08 205 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF699Q32M78 642 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANKRD55Q3KP44 614 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RABL6Q3YEC7 729 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LRRC23Q53EV4 343 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 C18orf65Q6ZTR6 163 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LPCAT2Q7L5N7 544 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LHFPL4Q7Z7J7 247 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LUZP1Q86V48 1076 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 NR2C2APQ86WQ0 139 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 CBWD2Q8IUF1 395 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZDHHC21Q8IVQ6 265 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ARFGAP2Q8N6H7 521 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 CHDHQ8NE62 594 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR52B6Q8NGF0 335 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR2T34Q8NGX1 318 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 FAM76AQ8TAV0 307 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF519Q8TB69 540 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 SPPL2AQ8TCT8 520 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RAET1EQ8TD07 263 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ARAP2Q8WZ64 1704 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 N4BP2L2Q92802 583 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 HPDLQ96IR7 371 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 VSTM2LQ96N03 204 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 TTC25Q96NG3 672 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 PGLYRP2Q96PD5 576 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 DUX3Q96PT4 197 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 CPXM1Q96SM3 734 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 POLR1EQ9GZS1 481 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 TMEM117Q9H0C3 514 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 ALG9Q9H6U8 611 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 KAT8Q9H7Z6 458 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 LPAR2Q9HBW0 351 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 FGF22Q9HCT0 170 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 POLD4Q9HCU8 107 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 STARD5Q9NSY2 213 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 EIF3KQ9UBQ5 218 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 GHRLQ9UBU3 117 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RFX7Q2KHR2 1363 aa2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 RPAP1Q9BWH6 1393 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 KIAA0100Q14667 2235 aaKnown RBP2.72□□□□□ -1.97
TRAPPC11-205ENST00000506426 KIF16BQ96L93 1317 aa2.71□□□□□ -1.98
TRAPPC11-205ENST00000506426 A0A0A6YYD4 124 aa2.71□□□□□ -1.98
TRAPPC11-205ENST00000506426 NPIPA5A0A0B4J1W7 369 aa2.71□□□□□ -1.98
TRAPPC11-205ENST00000506426 IGHV3-20A0A0C4DH32 117 aa2.71□□□□□ -1.98
TRAPPC11-205ENST00000506426 A0A0J9YVX5 310 aa2.71□□□□□ -1.98
TRAPPC11-205ENST00000506426 TTC26A0AVF1 554 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms