RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LIPGQ9Y5X9 500 aa15.24■□□□□ 0.03
SNCA-209ENST00000506244 NINQ8N4C6 2090 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 E9PLN8 166 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 SCO2O43819 266 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 TRAPPC6AO75865 159 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 KCNK2O95069 426 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 UTS2O95399 124 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 AGR2O95994 175 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 AK1P00568 194 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 NGFRP08138 427 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 ATP6V1C1P21283 382 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 AQP5P55064 265 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 WLSQ5T9L3 541 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 MSANTD1Q6ZTZ1 278 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 OR4K17Q8NGC6 315 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 PHF10Q8WUB8 498 aaKnown RBP15.23■□□□□ 0.03
SNCA-209ENST00000506244 CDS1Q92903 461 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 C16orf58Q96GQ5 468 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 TEX37Q96LM6 180 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 OR52E6Q96RD3 313 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 VKORC1Q9BQB6 163 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 YIPF4Q9BSR8 244 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 RMND5AQ9H871 391 aa15.23■□□□□ 0.03
SNCA-209ENST00000506244 DOPEY1Q5JWR5 2465 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 WIPF3A6NGB9 483 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 NPIPA2E9PIF3 369 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 NPIPA3F8WFD2 350 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 FADS1O60427 444 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 SCN2BO60939 215 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 HPGDP15428 266 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 CHI3L1P36222 383 aaPredicted RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 MRPL19P49406 292 aaKnown RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 IDH3AP50213 366 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 ANXA11P50995 505 aaKnown RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 TXNL4AP83876 142 aaKnown RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 GANABQ14697 944 aaKnown RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 DCST2Q5T1A1 773 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 C6orf120Q7Z4R8 191 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 DOLPP1Q86YN1 238 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 ZNF527Q8NB42 609 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 GOT1L1Q8NHS2 421 aaPredicted RBP15.22■□□□□ 0.03
SNCA-209ENST00000506244 PANX1Q96RD7 426 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 SLC6A15Q9H2J7 730 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 SERHLQ9NQF3 203 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 DKKL1Q9UK85 242 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 ACAD8Q9UKU7 415 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 MEMO1Q9Y316 297 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 ZNF407Q9C0G0 2248 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 DOPEY2Q9Y3R5 2298 aa15.22■□□□□ 0.03
SNCA-209ENST00000506244 SCDO00767 359 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 EDF1O60869 148 aaKnown RBP15.21■□□□□ 0.03
SNCA-209ENST00000506244 WDR1O75083 606 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 IGKV1D-16P01601 117 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 MATN1P21941 496 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 IL12AP29459 219 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 SRD5A2P31213 254 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 TRPC1P48995 793 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 KHKP50053 298 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 SMSP52788 366 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 DGKQP52824 942 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 GAS1P54826 345 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 PHC1P78364 1004 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 GRAMD1BQ3KR37 738 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 ATAD3BQ5T9A4 648 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 TMEM211Q6ICI0 200 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 FIGNL1Q6PIW4 674 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 MISPQ8IVT2 679 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 WDSUB1Q8N9V3 476 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 FAM83FQ8NEG4 500 aaPredicted RBP15.21■□□□□ 0.03
SNCA-209ENST00000506244 FAM110BQ8TC76 370 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 MIPOL1Q8TD10 442 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 OTUB1Q96FW1 271 aaPredicted RBP15.21■□□□□ 0.03
SNCA-209ENST00000506244 CCDC120Q96HB5 630 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 OR7D2Q96RA2 312 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 EBF4Q9BQW3 602 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 SLC35A5Q9BS91 424 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 OR2B2Q9GZK3 357 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 HOXD1Q9GZZ0 328 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 PTGES2Q9H7Z7 377 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 UBQLN4Q9NRR5 601 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 EXD2Q9NVH0 621 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 TMEM45AQ9NWC5 275 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 TRIM33Q9UPN9 1127 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 DNAJC13O75165 2243 aa15.21■□□□□ 0.03
SNCA-209ENST00000506244 PTPN13Q12923 2485 aa15.21■□□□□ 0.02
SNCA-209ENST00000506244 GTF3C1Q12789 2109 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 DIDO1Q9BTC0 2240 aaKnown RBP15.2■□□□□ 0.02
SNCA-209ENST00000506244 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 C2orf72A6NCS6 295 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 ALG1L2C9J202 215 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 C9JVG2 144 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 RFXANKO14593 260 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 ZG16O60844 167 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 HOXD4P09016 255 aaPredicted RBP15.2■□□□□ 0.02
SNCA-209ENST00000506244 TROVE2P10155 538 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCA-209ENST00000506244 GABRA1P14867 456 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 TBXA2RP21731 343 aa15.2■□□□□ 0.02
SNCA-209ENST00000506244 PTGER4P35408 488 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms