RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 DEFB108AA8MXU0 73 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 SMAD7O15105 426 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 CRCPO75575 148 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 TSPAN8P19075 237 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 DDCP20711 480 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 ME2P23368 584 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 LCP2Q13094 533 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 GALNT18Q6P9A2 607 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 OR6K3Q8NGY3 331 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 RNF138Q8WVD3 245 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 NGBQ9NPG2 151 aa18.96■□□□□ 0.63
SQSTM1-210ENST00000506042 A0A087WZY1 265 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 PABPC4LP0CB38 370 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 DDX5P17844 614 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 ATP5F1P24539 256 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 KIR2DL2P43627 348 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 GAS1P54826 345 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 DUSP2Q05923 314 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 C2orf80Q0P641 193 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 TRADDQ15628 312 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF678Q5SXM1 525 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 NPSR1Q6W5P4 371 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 SYT10Q6XYQ8 523 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 BEND4Q6ZU67 534 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 KRTAP1-3Q8IUG1 177 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 WDR75Q8IWA0 830 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 METTL25Q8N6Q8 603 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 FAM76AQ8TAV0 307 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 FNDC9Q8TBE3 224 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 C1GALT1C1Q96EU7 318 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 REXO5Q96IC2 774 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 GMPPAQ96IJ6 420 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 MED11Q9P086 117 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 PYCARDQ9ULZ3 195 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 C19orf53Q9UNZ5 99 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF337Q9Y3M9 751 aa18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 HRNRQ86YZ3 2850 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-210ENST00000506042 OR2M5A3KFT3 312 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 JUNP05412 331 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 IFI6P09912 130 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 HPGDP15428 266 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF17P17021 662 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 IMPDH1P20839 514 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 PCSK6P29122 969 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 RFX3P48380 749 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 CLDN15P56746 228 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 B3GALT5-AS1P59052 145 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 PSG6Q00889 435 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 EXOC3L2Q2M3D2 409 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF474Q6S9Z5 364 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 PLXDC2Q6UX71 529 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 IKBIPQ70UQ0 350 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 MNS1Q8NEH6 495 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 OR7G2Q8NG99 324 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 ZFP28Q8NHY6 868 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 FIG4Q92562 907 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 ACPTQ9BZG2 426 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 SIRT5Q9NXA8 310 aa18.94■□□□□ 0.62
SQSTM1-210ENST00000506042 A0A1W2PPR1 153 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 MYO1GB0I1T2 1018 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 FADS1O60427 444 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 IL33O95760 270 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 FESP07332 822 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 EIF1AXP47813 144 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF41P51814 821 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 BTKQ06187 659 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 ETFDHQ16134 617 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 RPS27LQ71UM5 84 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF610Q8N9Z0 462 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 DUSP19Q8WTR2 217 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 IFT81Q8WYA0 676 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 TACO1Q9BSH4 297 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 OR10A4Q9H209 315 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 ANKRA2Q9H9E1 313 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 TIGARQ9NQ88 270 aa18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 RRAGDQ9NQL2 400 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 DMGDHQ9UI17 866 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-210ENST00000506042 SERTM1A2A2V5 107 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 GSTA1P08263 222 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 GPC1P35052 558 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 PTH2RP49190 550 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 TMEM107Q6UX40 140 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF550Q7Z398 422 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 EXOC3L1Q86VI1 746 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 CEP70Q8NHQ1 597 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 ZBTB8AQ96BR9 441 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 TRMT61AQ96FX7 289 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 METTL2AQ96IZ6 378 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 EBPLQ9BY08 206 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 TAS2R7Q9NYW3 318 aa18.92■□□□□ 0.62
SQSTM1-210ENST00000506042 PPP6CO00743 305 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 CNOT4O95628 575 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 ANGPTL1O95841 491 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 WHAMMP3Q1A5X7 153 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 ZNF704Q6ZNC4 412 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 MISPQ8IVT2 679 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 OR2L13Q8N349 312 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 OR4N2Q8NGD1 307 aa18.91■□□□□ 0.62
SQSTM1-210ENST00000506042 ACMSDQ8TDX5 336 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms