RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 RAD21L1Q9H4I0 556 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 DEPPQ9NTK1 212 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 EXD2Q9NVH0 621 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC25A37Q9NYZ2 338 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 VAPAQ9P0L0 249 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 MPDZO75970 2070 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 MED12Q93074 2177 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 TTLL8A6PVC2 850 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 HMGN4O00479 90 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 LCE2BO14633 110 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 HS6ST1O60243 411 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 DCTN3O75935 186 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 UNC5CO95185 931 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 SNX4O95219 450 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 NPPAP01160 153 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 GUSBP08236 651 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 OR12D1P0DN82 309 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 MEOX1P50221 254 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 CASP9P55211 416 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 FADDQ13158 208 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 CYLC2Q14093 348 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 ARHGAP11BQ3KRB8 267 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 COX20Q5RI15 118 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 DCST2Q5T1A1 773 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 SLC30A6Q6NXT4 461 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 TNFAIP8L2Q6P589 184 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 FIGNL1Q6PIW4 674 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 TREML1Q86YW5 311 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 CISD2Q8N5K1 135 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 XAGE5Q8WWM1 108 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 RAB8BQ92930 207 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 SNRNP40Q96DI7 357 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 FRMD6Q96NE9 622 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 LRRC37BQ96QE4 947 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 TAAR6Q96RI8 345 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 SDF2Q99470 211 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 BARD1Q99728 777 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 METTL7AQ9H8H3 244 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 FBXO34Q9NWN3 711 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 ABCG2Q9UNQ0 655 aa10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 PHF3Q92576 2039 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-208ENST00000504489 A0A0G2JMM0 328 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 A0A1W2PPB8 328 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 A0A1W2PRS3 328 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 PRAMEF25A6NGN4 478 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 KIR3DP1A8MWS1 328 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 FADS1O60427 444 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 ICOSLGO75144 302 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 TRIM3O75382 744 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 KRT34O76011 436 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 UTS2O95399 124 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 NGFRP08138 427 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 BMP2P12643 396 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 COX4I1P13073 169 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 GPX2P18283 190 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 TBXA2RP21731 343 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 PTGDSP41222 190 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 DNASE1L1P49184 302 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 GPR85P60893 370 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 C19orf57Q0VDD7 668 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 FOXO1Q12778 655 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 NFYCQ13952 458 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 RGNQ15493 299 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 INPP5JQ15735 1006 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 TRMT5Q32P41 509 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 MMEL1Q495T6 779 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 RUNDC3AQ59EK9 446 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 CCNJQ5T5M9 372 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 PRAMEF20Q5VT98 475 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 BICRALQ6AI39 1079 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 ZNF324BQ6AW86 544 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM180AQ6UWF9 173 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 C16orf62Q7Z3J2 963 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 ZAR1Q86SH2 424 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 DHDDSQ86SQ9 333 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 PCYOX1LQ8NBM8 494 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 CCDC197Q8NCU1 140 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 PNPT1Q8TCS8 783 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 ANKRD27Q96NW4 1050 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 CGREF1Q99674 301 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 DOHHQ9BU89 302 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 OSBPL11Q9BXB4 747 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 HOXD1Q9GZZ0 328 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 POLE3Q9NRF9 147 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 UBQLN4Q9NRR5 601 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 AGPAT4Q9NRZ5 378 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 THUMPD1Q9NXG2 353 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 CORO2BQ9UQ03 480 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 LIPT1Q9Y234 373 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 NTNG1Q9Y2I2 539 aa10.9□□□□□ -0.66
PDLIM5-208ENST00000504489 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms