RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 HERC3Q15034 1050 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 USF2Q15853 346 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF284Q2VY69 593 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF829Q3KNS6 432 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PPP6R3Q5H9R7 873 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FNBP1LQ5T0N5 605 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PYHIN1Q6K0P9 492 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KCTD18Q6PI47 426 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PLXDC2Q6UX71 529 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SCARA5Q6ZMJ2 495 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRMT10CQ7L0Y3 403 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ANKRD33Q7Z3H0 272 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FAM114A1Q8IWE2 563 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TDHQ8IZJ6 230 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RBFAQ8N0V3 343 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RBMXL3Q8N7X1 1067 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BMPERQ8N8U9 685 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ASCC1Q8N9N2 400 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR10Q1Q8NGQ4 319 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR14A16Q8NHC5 309 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LRRC20Q8TCA0 184 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CD300LFQ8TDQ1 290 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GRHL3Q8TE85 626 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ESR2Q92731 530 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMEM45BQ96B21 275 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SENP5Q96HI0 755 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 VSTM2LQ96N03 204 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CASD1Q96PB1 797 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MTMR9Q96QG7 549 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ACCSQ96QU6 501 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR1F2PQ96R84 312 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CYTH2Q99418 400 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RTP3Q9BQQ7 232 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NPFFR1Q9GZQ6 430 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 POLR3FQ9H1D9 316 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PORCNQ9H237 461 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SEMA6AQ9H2E6 1030 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KCNN2Q9H2S1 579 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ACTL8Q9H568 366 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 AZI2Q9H6S1 392 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PCDH9Q9HC56 1237 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NOX4Q9NPH5 578 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DDX28Q9NUL7 540 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ERVK-18Q9QC07 812 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EPHA6Q9UF33 1036 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ERRFI1Q9UJM3 462 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TBC1D24Q9ULP9 559 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 WDR83OSQ9Y284 106 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LOXL2Q9Y4K0 774 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DNAH12Q6ZR08 3092 aa3.84□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SZT2Q5T011 3432 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR2M5A3KFT3 312 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SNTNA6NMZ2 147 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 E9PMD0 336 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SGK494L7N484 410 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SYT7O43581 403 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 LDB2O43679 373 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR1F1O43749 312 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SORBS2O94875 1100 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NDUFA7O95182 113 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TSPAN12O95859 305 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 FTH1P02794 183 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 HOXC6P09630 235 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GOLGA8HP0CJ92 632 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CT45A8P0DMV1 189 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CT45A9P0DMV2 189 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ANPEPP15144 967 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 GOT1P17174 413 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TPSB2P20231 275 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 BDKRB2P30411 391 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SLC1A4P43007 532 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NAMPTP43490 491 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RPS5P46782 204 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 OR3A3P47888 321 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TAS2R38P59533 333 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SNAP25P60880 206 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RAB11AP62491 216 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 XIAPP98170 497 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ENPEPQ07075 957 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ASPHQ12797 758 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NFATC2Q13469 925 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ELAVL3Q14576 367 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 NCF4Q15080 339 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TPSAB1Q15661 275 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RAB11BQ15907 218 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 CT45A2Q5DJT8 189 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ELFN2Q5R3F8 820 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 MLIPQ5VWP3 458 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ATL3Q6DD88 541 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 C8orf74Q6P047 294 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TMEM53Q6P2H8 277 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 TTC27Q6P3X3 843 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 WASH2PQ6VEQ5 465 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 STXBP4Q6ZWJ1 553 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 SSX9Q7RTT3 188 aa3.83□□□□□ -1.8
PDLIM1P4-201ENST00000504327 ZNF367Q7RTV3 350 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms