RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ADAM32Q8TC27 787 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CREB3L4Q8TEY5 395 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 C3orf49Q96BT1 292 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SMARCD1Q96GM5 515 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF354BQ96LW1 612 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 C3orf30Q96M34 536 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR4K3Q96R72 315 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SLC22A11Q9NSA0 550 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 C14orf105Q9NVL8 296 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GFOD1Q9NXC2 390 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 COMMD9Q9P000 198 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TINAGQ9UJW2 476 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PSAT1Q9Y617 370 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ALG5Q9Y673 324 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 V9GYS6 101 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CBX4O00257 560 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PPP6CO00743 305 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 EIF1AYO14602 144 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GATBO75879 557 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TP53P04637 393 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 FBP1P09467 338 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GABRA1P14867 456 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CSF2RAP15509 400 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PSMB1P20618 241 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ALDH4A1P30038 563 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 RPS19P39019 145 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 KIR2DL3P43628 341 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 KIR3DL1P43629 444 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 EIF1AXP47813 144 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SNRPGP62308 76 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DLX2Q07687 328 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 FOXO1Q12778 655 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ARHGEF7Q14155 803 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TTLL4Q14679 1199 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PAN3Q58A45 887 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HENMT1Q5T8I9 393 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM236Q5W0B7 351 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM65Q6PI78 240 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ERN2Q76MJ5 926 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GRASPQ7Z6J2 395 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ADPRHL1Q8NDY3 354 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 STOML3Q8TAV4 291 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ELMOD3Q96FG2 381 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PTDSS2Q9BVG9 487 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DPCDQ9BVM2 203 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 REEP4Q9H6H4 257 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GPATCH2Q9NW75 528 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 THUMPD1Q9NXG2 353 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 UPB1Q9UBR1 384 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 MUTYHQ9UIF7 546 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TMEFF2Q9UIK5 374 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SCML1Q9UN30 329 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PKP3Q9Y446 797 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TENM4Q6N022 2769 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 A0A1W2PQL4 384 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TCRBV7S3A2A0A539 114 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR6C74A6NCV1 312 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF860A6NHJ4 632 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 B4GALT5O43286 388 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR2F2O95006 317 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIST1H2AGP0C0S8 130 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GKN3PP0CG01 181 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DAOP14920 347 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 EPB42P16452 691 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIST1H2ADP20671 130 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PRPS1L1P21108 318 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 NOS3P29474 1203 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PSEN2P49810 448 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 STK19P49842 368 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 RAB5CP51148 216 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR4D2P58180 307 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CYCSP99999 105 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TFAMQ00059 246 aaKnown RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 MTM1Q13496 603 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CAMK2DQ13557 499 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR2F1Q13607 317 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 GAS6Q14393 721 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CSHL1Q14406 222 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 UBXN2BQ14CS0 331 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PLK5Q496M5 336 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 IFI44LQ53G44 452 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIST2H2AA3Q6FI13 130 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CEP68Q76N32 757 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR1J1Q8NGS3 322 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 OR56A3Q8NH54 315 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TERB2Q8NHR7 220 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ESAMQ96AP7 390 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HAVCR1Q96D42 359 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 SAT2Q96F10 170 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 TMEM176AQ96HP8 235 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIST1H2AHQ96KK5 128 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 PPM1MQ96MI6 270 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 HIST1H2AJQ99878 128 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 RAB11FIP5Q9BXF6 653 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 POTEKPQ9BYX7 375 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 ADAM19Q9H013 955 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 DPEP2Q9H4A9 486 aa2.61□□□□□ -1.99
NEDD4-204ENST00000503468 CHMP1AQ9HD42 196 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-204ENST00000503468 KRCC1Q9NPI7 259 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms