RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 TAS2R9Q9NYW1 312 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 FLRT3Q9NZU0 649 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 STOML1Q9UBI4 398 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
CCDC58-207ENST00000498466 A0A096LPK6 155 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 A0A1W2PP18 115 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 SHISA8B8ZZ34 492 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 FADS1O60427 444 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 PDYNP01213 254 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 CD3EP07766 207 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 DANCRP0C864 163 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 IL11P20809 199 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 STX2P32856 288 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 TRA2BP62995 288 aaKnown RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 GLYR1Q49A26 553 aaPredicted RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 GGTA1PQ4G0N0 100 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 GGNQ86UU5 652 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 SAMD14Q8IZD0 417 aaPredicted RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 NEUROG1Q92886 237 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 S100PBPQ96BU1 408 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 GIMAP4Q9NUV9 329 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 NMRK1Q9NWW6 199 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 WHRNQ9P202 907 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 PCTPQ9UKL6 214 aa12.46□□□□□ -0.41
CCDC58-207ENST00000498466 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
CCDC58-207ENST00000498466 NDUFS7O75251 213 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 SYNGR4O95473 234 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 IL3P08700 152 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 PSG6Q00889 435 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 NAB1Q13506 487 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC58-207ENST00000498466 TECRLQ5HYJ1 363 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 MARCH3Q86UD3 253 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 OR7G2Q8NG99 324 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 OR10D3Q8NH80 312 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
CCDC58-207ENST00000498466 GPR78Q96P69 363 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 HBEGFQ99075 208 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 ALG2Q9H553 416 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 ESRP2Q9H6T0 727 aaKnown RBP12.45□□□□□ -0.42
CCDC58-207ENST00000498466 BRF2Q9HAW0 419 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 BARX1Q9HBU1 254 aaPredicted RBP12.45□□□□□ -0.42
CCDC58-207ENST00000498466 NGBQ9NPG2 151 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 GLRX2Q9NS18 164 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
CCDC58-207ENST00000498466 SNX6Q9UNH7 406 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 VDAC3Q9Y277 283 aa12.45□□□□□ -0.42
CCDC58-207ENST00000498466 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 ZSCAN12O43309 604 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 GPRIN2O60269 458 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 PLOD3O60568 738 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 COQ9O75208 318 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 TYK2P29597 1187 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 RFX3P48380 749 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 DECR1Q16698 335 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 KRTAP24-1Q3LI83 254 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
CCDC58-207ENST00000498466 CYP27C1Q4G0S4 372 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 NCMAPQ5T1S8 102 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 C6orf52Q5T4I8 152 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 RPS27LQ71UM5 84 aaKnown RBP12.44□□□□□ -0.42
CCDC58-207ENST00000498466 WDR75Q8IWA0 830 aaKnown RBP12.44□□□□□ -0.42
CCDC58-207ENST00000498466 FAM9CQ8IZT9 166 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 ERP44Q9BS26 406 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 TBL1XR1Q9BZK7 514 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 AMBRA1Q9C0C7 1298 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 VPS11Q9H270 941 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 FAM120CQ9NX05 1096 aaKnown RBP12.44□□□□□ -0.42
CCDC58-207ENST00000498466 VPS29Q9UBQ0 182 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
CCDC58-207ENST00000498466 SNX8Q9Y5X2 465 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 ABCA1O95477 2261 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 CR1P17927 2039 aa12.44□□□□□ -0.42
CCDC58-207ENST00000498466 GNG14A0A1W2PPG7 69 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 STX16-NPEPL1H3BU86 382 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 STX16O14662 325 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 CXCL13O43927 109 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 SSX4O60224 188 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 SMIM24O75264 130 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 OTCP00480 354 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 OPN1LWP04000 364 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 FESP07332 822 aa12.43□□□□□ -0.42
CCDC58-207ENST00000498466 TUBBP07437 444 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms