RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	NCBP2	P52298	156 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LIM2	P55344	173 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GFRA1	P56159	465 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR1D5	P58170	312 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BNC1	Q01954	994 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TNFRSF17	Q02223	184 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BIK	Q13323	160 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TP53BP2	Q13625	1128 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM53B	Q14153	422 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NR1D2	Q14995	579 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SHB	Q15464	509 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TRIP10	Q15642	601 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF630	Q2M218	657 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MPEG1	Q2M385	716 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HLA-B	Q31612	363 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM214A	Q32MH5	1076 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GRAMD1B	Q3KR37	738 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DEFB134	Q4QY38	66 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GARNL3	Q5VVW2	1013 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR52E8	Q6IFG1	317 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC48A1	Q6P1K1	146 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM92B	Q6ZTR7	304 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C6orf120	Q7Z4R8	191 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KMT5C	Q86Y97	462 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLC35F3	Q8IY50	421 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZZZ3	Q8IYH5	903 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR4N4	Q8N0Y3	316 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DNAJC22	Q8N4W6	341 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	METTL25	Q8N6Q8	603 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AMER3	Q8N944	861 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TTC29	Q8NA56	475 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C11orf65	Q8NCR3	313 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PAPD5	Q8NDF8	572 aa	Known RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C7orf57	Q8NEG2	295 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR4K14	Q8NGD5	310 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR4C6	Q8NH72	309 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PSMA8	Q8TAA3	256 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZCCHC10	Q8TBK6	192 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADAMTS18	Q8TE60	1221 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ANAPC16	Q96DE5	110 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AURKB	Q96GD4	344 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PYURF	Q96I23	114 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNF145	Q96MT1	663 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AMDHD1	Q96NU7	426 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FCRL4	Q96PJ5	515 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NR1H4	Q96RI1	486 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SEPHS2	Q99611	448 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CDC6	Q99741	560 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAPKAP1	Q9BPZ7	522 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ASPSCR1	Q9BZE9	553 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AICDA	Q9GZX7	198 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GLIPR2	Q9H4G4	154 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IKZF5	Q9H5V7	419 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM38A	Q9H6F2	299 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAGIX	Q9H6Y5	334 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GAREM1	Q9H706	876 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RPF2	Q9H7B2	306 aa	Known RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	VCX3A	Q9NNX9	186 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM60A	Q9NP50	221 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C8orf4	Q9NR00	106 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DCAF13	Q9NV06	445 aa	Known RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OLAH	Q9NV23	265 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IRAK4	Q9NWZ3	460 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADPRHL2	Q9NX46	363 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TEX10	Q9NXF1	929 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CES1P1	Q9UKY3	287 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DAPP1	Q9UN19	280 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLCA2	Q9UQC9	943 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MRPS33	Q9Y291	106 aa	Known RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ATG4B	Q9Y4P1	393 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SNX8	Q9Y5X2	465 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRBA	P50851	2863 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OTOG	Q6ZRI0	2925 aa		4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.95	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HYKK	A2RU49	373 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CPED1	A4D0V7	1026 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DPPA5	A6NC42	116 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DUXA	A6NLW8	204 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C4orf51	C9J302	202 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C5orf58	C9J3I9	102 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325		H0YJX3	145 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GNGT2	O14610	69 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TOX3	O15405	576 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	P2RX6	O15547	441 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	B4GAT1	O43505	415 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRAMEF10	O60809	474 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TIPRL	O75663	272 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AIFM1	O95831	613 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SERPINA1	P01009	418 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LDLR	P01130	860 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C9	P02748	559 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GIMD1	P0DJR0	217 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ETFA	P13804	333 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	POR	P16435	677 aa	Predicted RBP	4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MATN1	P21941	496 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HSPA13	P48723	471 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	XK	P51811	444 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RPS6KA3	P51812	740 aa		4.94	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MAPK10	P53779	464 aa		4.94	□□□□□ -1.62

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