RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 POLR2JP52435 117 aaKnown RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 WNT3P56703 355 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 HBA1P69905 142 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 POU6F2P78424 691 aaPredicted RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 LASP1Q14847 261 aaKnown RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 SF3B4Q15427 424 aaKnown RBP eCLIP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 MSANTD1Q6ZTZ1 278 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 PLCZ1Q86YW0 608 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 ZNF808Q8N4W9 903 aaPredicted RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 TRIML2Q8N7C3 387 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 OR4K17Q8NGC6 315 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 NEIL3Q8TAT5 605 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 FBXO30Q8TB52 745 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 PHF10Q8WUB8 498 aaKnown RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 ZNF317Q96PQ6 595 aaPredicted RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 PSMG3-AS1Q96PY0 264 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 STACQ99469 402 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 ACTRT3Q9BYD9 372 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 NSRP1Q9H0G5 558 aaKnown RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 DUSP22Q9NRW4 184 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 SIRT3Q9NTG7 399 aaPredicted RBP14.96□□□□□ -0.01
SF3A1-209ENST00000496189 COQ3Q9NZJ6 369 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 KLHL14Q9P2G3 628 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 DKKL1Q9UK85 242 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 LIPGQ9Y5X9 500 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 EML6Q6ZMW3 1958 aa14.96□□□□□ -0.01
SF3A1-209ENST00000496189 A1L4Q6 167 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 C2orf72A6NCS6 295 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 SCO2O43819 266 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 WDR1O75083 606 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 CPSF4O95639 269 aaKnown RBP14.95□□□□□ -0.02
SF3A1-209ENST00000496189 HPNP05981 417 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 HOXD4P09016 255 aaPredicted RBP14.95□□□□□ -0.02
SF3A1-209ENST00000496189 GP1BBP13224 206 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 GABRA1P14867 456 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PTPN6P29350 595 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 IL12AP29459 219 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 DGKQP52824 942 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 GXYLT1Q4G148 440 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 CDC73Q6P1J9 531 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 ZNF585AQ6P3V2 769 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 XKRXQ6PP77 449 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 MAMDC2Q7Z304 686 aaPredicted RBP14.95□□□□□ -0.02
SF3A1-209ENST00000496189 MRGPRGQ86SM5 289 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 ANKRD46Q86W74 232 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PM20D2Q8IYS1 436 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 CLECL1Q8IZS7 167 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 SLC16A11Q8NCK7 471 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 OR14L1PQ8NHC6 308 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PIK3R3Q92569 461 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 CCDC115Q96NT0 180 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PANX1Q96RD7 426 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 YIPF4Q9BSR8 244 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 SLC6A15Q9H2J7 730 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 CXorf36Q9H7Y0 433 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PTGES2Q9H7Z7 377 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 GIN1Q9NXP7 522 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 ALKBH4Q9NXW9 302 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 PLEKHB1Q9UF11 243 aaPredicted RBP14.95□□□□□ -0.02
SF3A1-209ENST00000496189 HIVEP3Q5T1R4 2406 aa14.95□□□□□ -0.02
SF3A1-209ENST00000496189 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 RNF103-CHMP3A0A140T963 221 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 DUXAA6NLW8 204 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 FAM47E-STBD1D6RA91 191 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 ZNHIT1O43257 154 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 UTS2O95399 124 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 ACP2P11117 423 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 UQCRC2P22695 453 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 PTGER4P35408 488 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.94□□□□□ -0.02
SF3A1-209ENST00000496189 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 C3P1Q6ZMU1 363 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 FGD2Q7Z6J4 655 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 CHERPQ8IWX8 916 aaKnown RBP14.94□□□□□ -0.02
SF3A1-209ENST00000496189 OR5M9Q8NGP3 310 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 OR5AK3PQ8NH89 298 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 GIMAP5Q96F15 307 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 ITCHQ96J02 903 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 SLC35G5Q96KT7 338 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 PHF12Q96QT6 1004 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 BTBD2Q9BX70 525 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 UBQLN3Q9H347 655 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 PIGUQ9H490 435 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 SERHLQ9NQF3 203 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 CCDC167Q9P0B6 97 aa14.94□□□□□ -0.02
SF3A1-209ENST00000496189 GXYLT2A0PJZ3 443 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 CCDC154A6NI56 674 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 C9JVG2 144 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 SCDO00767 359 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 RFXANKO14593 260 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 SCN2BO60939 215 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 KCNK2O95069 426 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 AGR2O95994 175 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 AGAP20933 346 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 ACVR2AP27037 513 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 LSP1P33241 339 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 CHI3L1P36222 383 aaPredicted RBP14.93□□□□□ -0.02
SF3A1-209ENST00000496189 PTGDSP41222 190 aa14.93□□□□□ -0.02
SF3A1-209ENST00000496189 ANXA11P50995 505 aaKnown RBP14.93□□□□□ -0.02
SF3A1-209ENST00000496189 PHC1P78364 1004 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms