RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	ADAM10	O14672	748 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GNB5	O14775	395 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	CFLAR	O15519	480 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	ZNHIT1	O43257	154 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	TRAPPC6A	O75865	159 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	SASH3	O75995	380 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	NGFR	P08138	427 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	ALDOC	P09972	364 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	IDO1	P14902	403 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GAS1	P54826	345 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	WNT3	P56703	355 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	HBA1	P69905	142 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	LRRC74A	Q0VAA2	488 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	NHSL2	Q5HYW2	709 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	EMC4	Q5J8M3	183 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	WLS	Q5T9L3	541 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	TMEM211	Q6ICI0	200 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	OR4F3	Q6IEY1	312 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	SZRD1	Q7Z422	152 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	CD163	Q86VB7	1156 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	DYDC1	Q8WWB3	177 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	PIK3R3	Q92569	461 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	SLC9A6	Q92581	669 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	C16orf58	Q96GQ5	468 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	G6PC3	Q9BUM1	346 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	ACTRT3	Q9BYD9	372 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	PIGU	Q9H490	435 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	FAF1	Q9UNN5	650 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	HRH3	Q9Y5N1	445 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	WIF1	Q9Y5W5	379 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	LIPG	Q9Y5X9	500 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	GPR45	Q9Y5Y3	372 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	HECTD1	Q9ULT8	2610 aa		11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	SETX	Q7Z333	2677 aa	Known RBP	11.28	□□□□□ -0.6
MRPL55-233	ENST00000495899	UTP20	O75691	2785 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	GXYLT2	A0PJZ3	443 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	FIGNL2	A6NMB9	653 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899		E9PBE3	544 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	SCN2B	O60939	215 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	WDR1	O75083	606 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	KCNK2	O95069	426 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	UTS2	O95399	124 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	ACP2	P11117	423 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	GABRA1	P14867	456 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	ENDOU	P21128	410 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	EVI2B	P34910	448 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	PTGER4	P35408	488 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	GCK	P35557	465 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	ART3	Q13508	389 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	TP53BP2	Q13625	1128 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	DUSP5	Q16690	384 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	GSTA3	Q16772	222 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	SLC9B1	Q4ZJI4	515 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	NXN	Q6DKJ4	435 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	CDC73	Q6P1J9	531 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	EPGN	Q6UW88	154 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	MAVS	Q7Z434	540 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	MRGPRG	Q86SM5	289 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	RMND5B	Q96G75	393 aa	Predicted RBP	11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	ZBTB18	Q99592	522 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	BTBD2	Q9BX70	525 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	SERHL	Q9NQF3	203 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	PNPLA3	Q9NST1	481 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	GPATCH2	Q9NW75	528 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	SPRR3	Q9UBC9	169 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	BTNL2	Q9UIR0	455 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	USH1C	Q9Y6N9	552 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	HIVEP3	Q5T1R4	2406 aa		11.27	□□□□□ -0.61
MRPL55-233	ENST00000495899	DUXA	A6NLW8	204 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	AHRR	A9YTQ3	701 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	SLC22A3	O75751	556 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	CLDN1	O95832	211 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	ACTL6A	O96019	429 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	IGKV1D-16	P01601	117 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	IL6	P05231	212 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	TBXA2R	P21731	343 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	ACVR2A	P27037	513 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	SRD5A2	P31213	254 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	S100A3	P33764	101 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	TRPC1	P48995	793 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	UFM1	P61960	85 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	PHC1	P78364	1004 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	POU6F2	P78424	691 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	ADORA2A-AS1	P86434	159 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	C17orf67	Q0P5P2	114 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	LASP1	Q14847	261 aa	Known RBP	11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	TOMM20	Q15388	145 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	SWI5	Q1ZZU3	235 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	FAM174B	Q3ZCQ3	159 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	PDCD4	Q53EL6	469 aa	Known RBP	11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	SPANXN4	Q5MJ08	99 aa		11.26	□□□□□ -0.61
MRPL55-233	ENST00000495899	VASN	Q6EMK4	673 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms