RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 HPCAP84074 193 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 FOXO1Q12778 655 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 SLC10A1Q14973 349 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 MAPRE2Q15555 327 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 HYAL4Q2M3T9 481 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 FLYWCH1Q4VC44 716 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 CCNJQ5T5M9 372 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 RNF130Q86XS8 419 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 GHDCQ8N2G8 530 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 TMEM251Q8N6I4 163 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 ZNF527Q8NB42 609 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 FAM110BQ8TC76 370 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 MIPOL1Q8TD10 442 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 TSPEARQ8WU66 669 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 C10orf82Q8WW14 230 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 DEFB127Q9H1M4 99 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 RAD21L1Q9H4I0 556 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 ZNF385DQ9H6B1 395 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 LDAHQ9H6V9 325 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 EXO5Q9H790 373 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 TPT1P8Q9HAU6 139 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 HHATLQ9HCP6 504 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 SERHLQ9NQF3 203 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 UBQLN4Q9NRR5 601 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 PPP4R1LQ9P1A2 415 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 LEF1Q9UJU2 399 aaPredicted RBP11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 WIF1Q9Y5W5 379 aa11.06□□□□□ -0.64
CSNK1E-213ENST00000495232 TMEM247A6NEH6 219 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 STX11O75558 287 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 PDE9AO76083 593 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 WISP1O95388 367 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 IGKV1D-16P01601 117 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 CAPN3P20807 821 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 PPIBP23284 216 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 CRATP43155 626 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 MAGEA8P43361 318 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 UBAP2LQ14157 1087 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 GRAMD1BQ3KR37 738 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 ARHGAP11BQ3KRB8 267 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 MMEL1Q495T6 779 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 GPAT3Q53EU6 434 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 EXOSC6Q5RKV6 272 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 TIGD3Q6B0B8 471 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 SIAH3Q8IW03 269 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 OR52N2Q8NGI0 321 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 ZFP90Q8TF47 636 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 GNRHR2Q96P88 292 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 ZNF703Q9H7S9 590 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 SAR1AQ9NR31 198 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 QPCTLQ9NXS2 382 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 PCDHB14Q9Y5E9 798 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
CSNK1E-213ENST00000495232 SHANK1Q9Y566 2161 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 LRRC3CA6NJW4 275 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 EVPLLA8MZ36 301 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 H3BNH8 94 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 CLIC1O00299 241 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 SNPHO15079 494 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 NDUFB5O43674 189 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 FADS1O60427 444 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 CBR3O75828 277 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 OXSR1O95747 527 aaPredicted RBP11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 NGFRP08138 427 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 RFPL3SP0C7P2 107 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 ABOP16442 354 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 TBXA2RP21731 343 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 GCKP35557 465 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PTGDSP41222 190 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 CASP6P55212 293 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 KCNC4Q03721 635 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 C17orf67Q0P5P2 114 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 KLF10Q13118 480 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 STX5Q13190 355 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 CMPK2Q5EBM0 449 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PAGE3Q5JUK9 113 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 OR5M10Q6IEU7 315 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 ARHGAP11AQ6P4F7 1023 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 MARCH3Q86UD3 253 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PLCZ1Q86YW0 608 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 CHDHQ8NE62 594 aaPredicted RBP11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 OR4K17Q8NGC6 315 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 OR4C3Q8NH37 302 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 RAB8BQ92930 207 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 SDF2Q99470 211 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PAIP1Q9H074 479 aaKnown RBP11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 SERHL2Q9H4I8 314 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 PTGES2Q9H7Z7 377 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 ZDHHC11Q9H8X9 412 aa11.04□□□□□ -0.64
CSNK1E-213ENST00000495232 SLC6A13Q9NSD5 602 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms