RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 OR52P1PQ8NH57 321 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 NUBPLQ8TB37 319 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 PCSK5Q92824 1860 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 C8orf44Q96CB5 159 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 GAL3ST4Q96RP7 486 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 ZNF347Q96SE7 839 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 NXF5Q9H1B4 397 aaKnown RBP10.2□□□□□ -0.78
PKP4-215ENST00000494945 EVA1AQ9H8M9 152 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 KLHL28Q9NXS3 571 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 DLL3Q9NYJ7 618 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 SLC13A4Q9UKG4 626 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 ZNF443Q9Y2A4 671 aaPredicted RBP10.2□□□□□ -0.78
PKP4-215ENST00000494945 SLC9A8Q9Y2E8 581 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 SH3GLB1Q9Y371 365 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 HS3ST3B1Q9Y662 390 aa10.2□□□□□ -0.78
PKP4-215ENST00000494945 hCG_2039718K7EN88 272 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 SOCS6O14544 535 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 GNGT2O14610 69 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 TERTO14746 1132 aaKnown RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 DXOO77932 396 aaKnown RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 IL33O95760 270 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 LGI1O95970 557 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 IGKV1D-16P01601 117 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 PEX2P28328 305 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 DLSTP36957 453 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 PUM1Q14671 1186 aaKnown RBP eCLIP10.19□□□□□ -0.78
PKP4-215ENST00000494945 NNATQ16517 81 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 IQCCQ4KMZ1 466 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 LIN52Q52LA3 116 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 RNF220Q5VTB9 566 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 LPCAT4Q643R3 524 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 OR2T5Q6IEZ7 315 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 NDUFAF7Q7L592 441 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 PPP1R32Q7Z5V6 425 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 PACS2Q86VP3 889 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 CARM1Q86X55 608 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 VRK2Q86Y07 508 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 SLC34A3Q8N130 599 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 OR5L2Q8NGL0 311 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 OR2T29Q8NH02 315 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 M1APQ8TC57 530 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 EME1Q96AY2 570 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ZG16BQ96DA0 208 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 IMMP1LQ96LU5 166 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ZNF300Q96RE9 604 aaPredicted RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 ARHGDIGQ99819 225 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 MESP1Q9BRJ9 268 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 C9orf16Q9BUW7 83 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 RSPO3Q9BXY4 272 aaPredicted RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 AMBRA1Q9C0C7 1298 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 KLHL4Q9C0H6 718 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 NRSN2Q9GZP1 204 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 HOXD1Q9GZZ0 328 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 QRSL1Q9H0R6 528 aaKnown RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 SEMA6AQ9H2E6 1030 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 VCXQ9H320 206 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ARMC7Q9H6L4 198 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ASCL3Q9NQ33 180 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 RYDENQ9NUL5 291 aaKnown RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 FBXO34Q9NWN3 711 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 NDUFAF4Q9P032 175 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ZNF223Q9UK11 482 aaPredicted RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 KCND3Q9UK17 655 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 CNOT11Q9UKZ1 510 aaKnown RBP10.19□□□□□ -0.78
PKP4-215ENST00000494945 ABCG2Q9UNQ0 655 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 PCDHGA6Q9Y5G7 932 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 ENPP4Q9Y6X5 453 aa10.19□□□□□ -0.78
PKP4-215ENST00000494945 MED13Q9UHV7 2174 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 TRBV11-1A0A0K0K1C0 115 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 PRAMEF25A6NGN4 478 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 NPIPB9F8W1W9 429 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 ADAMDEC1O15204 470 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 UGT2B17O75795 530 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 DNAJB5O75953 348 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 ZFAND5O76080 213 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 NID1P14543 1247 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 RHCEP18577 417 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 TNFRSF1BP20333 461 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 KRT20P35900 424 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 DCTP40126 519 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 OR1E2P47887 323 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 RFX3P48380 749 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 NR0B1P51843 470 aaKnown RBP10.18□□□□□ -0.78
PKP4-215ENST00000494945 ATP12AP54707 1039 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 NRG3P56975 720 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 EEF1A1P68104 462 aaKnown RBP10.18□□□□□ -0.78
PKP4-215ENST00000494945 GK3PQ14409 553 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 ZNF141Q15928 474 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 NRF1Q16656 503 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 RSPO4Q2I0M5 234 aaPredicted RBP10.18□□□□□ -0.78
PKP4-215ENST00000494945 GRAMD1BQ3KR37 738 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 FAM69BQ5VUD6 431 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 PLAG1Q6DJT9 500 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 KIRREL2Q6UWL6 708 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 ZNF836Q6ZNA1 936 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 ZAR1Q86SH2 424 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 CYP4Z1Q86W10 505 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 MARCH9Q86YJ5 346 aa10.18□□□□□ -0.78
PKP4-215ENST00000494945 RAB43Q86YS6 212 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms