RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ZFP36L2P47974 494 aaKnown RBP16.06■□□□□ 0.16
HDAC4-211ENST00000494800 CCT3P49368 545 aaKnown RBP16.06■□□□□ 0.16
HDAC4-211ENST00000494800 TP53BP2Q13625 1128 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 RCAN2Q14206 197 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 OR5M10Q6IEU7 315 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 LILRB4Q8NHJ6 448 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 PSMA8Q8TAA3 256 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 FBXO30Q8TB52 745 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 SFXN5Q8TD22 340 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 HOXB13Q92826 284 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-211ENST00000494800 GIMAP5Q96F15 307 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 UGT2B28Q9BY64 529 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 MANSC1Q9H8J5 431 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 MRPS18CQ9Y3D5 142 aaKnown RBP16.06■□□□□ 0.16
HDAC4-211ENST00000494800 GTF3C1Q12789 2109 aa16.06■□□□□ 0.16
HDAC4-211ENST00000494800 GXYLT2A0PJZ3 443 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 HSPB2A8KAH6 182 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 HDAC3O15379 428 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 FADS1O60427 444 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 SNNO75324 88 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 UTS2O95399 124 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 C6orf47O95873 294 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 HMGN2P05204 90 aaKnown RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 DPP4P27487 766 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 SOAT1P35610 550 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 MAP3K8P41279 467 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 CLNS1AP54105 237 aaKnown RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 GAS1P54826 345 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 DIO3P55073 304 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 DSCR4P56555 118 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 C17orf67Q0P5P2 114 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 STX5Q13190 355 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 GANABQ14697 944 aaKnown RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 LASP1Q14847 261 aaKnown RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 HSPB2Q16082 182 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 DPY19L1Q2PZI1 675 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 RIPPLY2Q5TAB7 128 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 ANXA8L1Q5VT79 327 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 RTL6Q6ICC9 239 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 CCDC71Q8IV32 467 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 SLC16A11Q8NCK7 471 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 ADAMTS15Q8TE58 950 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 SFXN2Q96NB2 322 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 STACQ99469 402 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 ACTRT3Q9BYD9 372 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 DUSP22Q9NRW4 184 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 SIRT3Q9NTG7 399 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-211ENST00000494800 GIN1Q9NXP7 522 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 FBXL2Q9UKC9 423 aa16.05■□□□□ 0.16
HDAC4-211ENST00000494800 FAM90A27PA6NNH2 459 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 EPPINO95925 133 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 ACP2P11117 423 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 ATP6V1C1P21283 382 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 KIR3DL1P43629 444 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 POU6F2P78424 691 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-211ENST00000494800 CDSNQ15517 529 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 DUSP5Q16690 384 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC4-211ENST00000494800 ACSF3Q4G176 576 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-211ENST00000494800 OGFOD2Q6N063 350 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 SPATA19Q7Z5L4 167 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 OR8J2Q8NGG1 315 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 C16orf58Q96GQ5 468 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 YIPF4Q9BSR8 244 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 DSN1Q9H410 356 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 PIGUQ9H490 435 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 CXorf36Q9H7Y0 433 aa16.04■□□□□ 0.16
HDAC4-211ENST00000494800 NCOA6Q14686 2063 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-211ENST00000494800 H0Y3Z8 333 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
HDAC4-211ENST00000494800 SCDO00767 359 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 KCNK2O95069 426 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 ANGPTL1O95841 491 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 IL2RAP01589 272 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 NGFRP08138 427 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 KITP10721 976 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 CPN1P15169 458 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 CHMP24386 653 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 CDC73Q6P1J9 531 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 FIGNL1Q6PIW4 674 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 HDXQ7Z353 690 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 MARCH3Q86UD3 253 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 DUSP19Q8WTR2 217 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 TESCQ96BS2 214 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 WDYHV1Q96HA8 205 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 ATP6V1G3Q96LB4 118 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 TRIB1Q96RU8 372 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 UBQLN4Q9NRR5 601 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-211ENST00000494800 ZNF407Q9C0G0 2248 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 NINQ8N4C6 2090 aa16.03■□□□□ 0.16
HDAC4-211ENST00000494800 A0A0G2JNJ9 132 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 DUXAA6NLW8 204 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 LINC01387J3KSC0 135 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 KLF11O14901 512 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 NDUFB5O43674 189 aa16.02■□□□□ 0.16
HDAC4-211ENST00000494800 IGKV1D-16P01601 117 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms