RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 APIPQ96GX9 242 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 ZNF681Q96N22 645 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 CDC42EP4Q9H3Q1 356 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 Q9N2J8 555 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 EQTNQ9NQ60 294 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 FLRT3Q9NZU0 649 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 MRTO4Q9UKD2 239 aaKnown RBP8.68□□□□□ -1.02
UBR4-216ENST00000494503 VDAC3Q9Y277 283 aa8.68□□□□□ -1.02
UBR4-216ENST00000494503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 CCDC151A5D8V7 595 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 EMC8O43402 210 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 OPN1LWP04000 364 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 ANXA4P09525 319 aaPredicted RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 COL6A2P12110 1019 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 HSD3B1P14060 373 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 TBXA2RP21731 343 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 HSD3B2P26439 372 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 TIA1P31483 386 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBR4-216ENST00000494503 GPC1P35052 558 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 HSD17B3P37058 310 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 HTR6P50406 440 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 PSMD4P55036 377 aaKnown RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 ATP5J2P56134 94 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 B3GALT5-AS1P59052 145 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 CKAP4Q07065 602 aaKnown RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 C2orf80Q0P641 193 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 BCL2A1Q16548 175 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 PRR14LQ5THK1 2151 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 C17orf53Q8N3J3 647 aaPredicted RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 C16orf78Q8WTQ4 265 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 DUSP19Q8WTR2 217 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 ERP27Q96DN0 273 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 MDFIQ99750 246 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 ACPTQ9BZG2 426 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 CXorf56Q9H5V9 222 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 C12orf49Q9H741 205 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 FANCFQ9NPI8 374 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 MRPS18CQ9Y3D5 142 aaKnown RBP8.67□□□□□ -1.02
UBR4-216ENST00000494503 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 TIMM22Q9Y584 194 aa8.67□□□□□ -1.02
UBR4-216ENST00000494503 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 EXOC1LA0A1B0GW35 172 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 B4DXG7 233 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 CLOCKO15516 846 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 KCNH1O95259 989 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 SYNGR4O95473 234 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 GABRA3P34903 492 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 GAS1P54826 345 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 RAE1P78406 368 aaKnown RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 ZNF763Q0D2J5 394 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 HSPB3Q12988 150 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 VEZF1Q14119 521 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 BEX5Q5H9J7 111 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 ZNF704Q6ZNC4 412 aaPredicted RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 FAM214BQ7L5A3 538 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 GALNT10Q86SR1 603 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 STK32CQ86UX6 486 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 MMGT1Q8N4V1 131 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 CCNYL1Q8N7R7 359 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 FADS6Q8N9I5 356 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 GATSQ8NAP1 163 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 MAPK1IP1LQ8NDC0 245 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 FBXO30Q8TB52 745 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 C1GALT1C1Q96EU7 318 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 KCNA7Q96RP8 456 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 FMO2Q99518 471 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 TACO1Q9BSH4 297 aaKnown RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 TMEM185BQ9H7F4 350 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 RNF122Q9H9V4 155 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 MCTS1Q9ULC4 181 aaKnown RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 ABCG2Q9UNQ0 655 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 ZNF175Q9Y473 711 aa8.66□□□□□ -1.02
UBR4-216ENST00000494503 POLR3HQ9Y535 204 aaPredicted RBP8.66□□□□□ -1.02
UBR4-216ENST00000494503 COL6A5A8TX70 2615 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ATRQ13535 2644 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 RAI1Q7Z5J4 1906 aaPredicted RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 A0A087WUV0 522 aaPredicted RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 GOLGA8RI6L899 631 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 LINC01387J3KSC0 135 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 PLOD3O60568 738 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 AQP8O94778 261 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 UTS2O95399 124 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ANGPTL1O95841 491 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 TP53P04637 393 aaPredicted RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 GSTA1P08263 222 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 CD8BP10966 210 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 HPGDP15428 266 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 DDCP20711 480 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ME2P23368 584 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 MAGEA12P43365 314 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ZNF41P51814 821 aaPredicted RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 PRKAG1P54619 331 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms