RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL1A1-208ENST00000494334 PDE9AO76083 593 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 ANP32DO95626 131 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 CELA3AP09093 270 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 OR12D1P0DN82 309 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 KCNC4Q03721 635 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 SLC10A1Q14973 349 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 GRAMD1BQ3KR37 738 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 PAGE3Q5JUK9 113 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 C6orf10Q5SRN2 563 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 DCST2Q5T1A1 773 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 TNFAIP8L2Q6P589 184 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-208ENST00000494334 ANGPTL8Q6UXH0 198 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-208ENST00000494334 RNF130Q86XS8 419 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 CHERPQ8IWX8 916 aaKnown RBP12.37□□□□□ -0.43
COL1A1-208ENST00000494334 OR1J4Q8NGS1 313 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 OR4C3Q8NH37 302 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 ZFP90Q8TF47 636 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 G6PC3Q9BUM1 346 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 PAIP1Q9H074 479 aaKnown RBP12.37□□□□□ -0.43
COL1A1-208ENST00000494334 UBQLN3Q9H347 655 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 ABCG2Q9UNQ0 655 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 PCDHB14Q9Y5E9 798 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 HRH3Q9Y5N1 445 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 A0A1B0GTH9 108 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 A0A1W2PP18 115 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 C17orf51A8MQB3 221 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 B4DXG7 233 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 SCO2O43819 266 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 IGHG3P01860 377 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 TBXA2RP21731 343 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 ELAVL4P26378 380 aaKnown RBP12.36□□□□□ -0.43
COL1A1-208ENST00000494334 LCN1P31025 176 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 LSP1P33241 339 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 MVDP53602 400 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 HEPHL1Q6MZM0 1159 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 PLCZ1Q86YW0 608 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 CHDHQ8NE62 594 aaPredicted RBP12.36□□□□□ -0.43
COL1A1-208ENST00000494334 PNPT1Q8TCS8 783 aaKnown RBP12.36□□□□□ -0.43
COL1A1-208ENST00000494334 XAGE5Q8WWM1 108 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 RAB8BQ92930 207 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 SDF2Q99470 211 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 TPT1P8Q9HAU6 139 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 QPCTLQ9NXS2 382 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 B4GALT7Q9UBV7 327 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 OSGIN2Q9Y236 505 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 C15orf41Q9Y2V0 281 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 LIPGQ9Y5X9 500 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 NINQ8N4C6 2090 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
COL1A1-208ENST00000494334 A0A096LPI6 279 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 PRAMEF27A3QJZ7 478 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ALG1L2C9J202 215 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 HMGN4O00479 90 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 CBR3O75828 277 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 KRT75O95678 551 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 OXSR1O95747 527 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 AGR2O95994 175 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 AK1P00568 194 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 NGFRP08138 427 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 HOXB9P17482 250 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 GDF1P27539 372 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 CLK3P49761 638 aaKnown RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 KHKP50053 298 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 GNGT1P63211 74 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 RBPJQ06330 500 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 UBAP2LQ14157 1087 aaKnown RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ARHGAP11BQ3KRB8 267 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 COX20Q5RI15 118 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 LRIF1Q5T3J3 769 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 OR5M10Q6IEU7 315 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 TRILQ7L0X0 811 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 DUSP19Q8WTR2 217 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
COL1A1-208ENST00000494334 TBL1XR1Q9BZK7 514 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ACKR4Q9NPB9 350 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 SDHAF3Q9NRP4 125 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 UBQLN4Q9NRR5 601 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 EXD2Q9NVH0 621 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 FAM53CQ9NYF3 392 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 FBXL2Q9UKC9 423 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 ZNF835Q9Y2P0 537 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 NDUFAF1Q9Y375 327 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 SVILO95425 2214 aa12.35□□□□□ -0.43
COL1A1-208ENST00000494334 TRGV5A0A0B4J1U4 118 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms