RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	DLEU7	Q6UYE1	221 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ZBTB49	Q6ZSB9	765 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	TMPRSS11F	Q6ZWK6	438 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ZNF551	Q7Z340	670 aa	Predicted RBP	10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	RAB43	Q86YS6	212 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	SLC25A45	Q8N413	288 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ARRDC1	Q8N5I2	433 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	EID2	Q8N6I1	236 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	MRGPRD	Q8TDS7	321 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ZFP90	Q8TF47	636 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	PHF21B	Q96EK2	531 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR52B2	Q96RD2	323 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	DCLRE1C	Q96SD1	692 aa	Known RBP	10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	YIPF4	Q9BSR8	244 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	CHRAC1	Q9NRG0	131 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	TAS2R9	Q9NYW1	312 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ZNF639	Q9UID6	485 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	ADAM30	Q9UKF2	790 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	SLC17A4	Q9Y2C5	497 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	PEX16	Q9Y5Y5	336 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919		U3KQ87	197 aa		10.89	□□□□□ -0.67
BRCA1-222	ENST00000493919	CIB4	A0PJX0	185 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MEX3A	A1L020	520 aa	Known RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	METTL21EP	A6NDL7	271 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	BTBD17	A6NE02	478 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	UBE2C	O00762	179 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	TNFRSF10C	O14798	259 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SURF4	O15260	269 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	RAD1	O60671	282 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	BANF1	O75531	89 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	PRSS56	P0CW18	603 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GAA	P10253	952 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SDHB	P21912	280 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CA5A	P35218	305 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GMPR	P36959	345 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MAGEB1	P43366	347 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	RGS6	P49758	472 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MECP2	P51608	486 aa	Known RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SELENOV	P59797	346 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CD81	P60033	236 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTB	P60709	375 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTA2	P62736	377 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTG1	P63261	375 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTG2	P63267	376 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTC1	P68032	377 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ACTA1	P68133	377 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GPR50	Q13585	617 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ELOC	Q15369	112 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MAPK11	Q15759	364 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	COL28A1	Q2UY09	1125 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GPRC6A	Q5T6X5	926 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	FAM69A	Q5T7M9	428 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CES3	Q6UWW8	571 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ZBTB46	Q86UZ6	589 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	TRAPPC5	Q8IUR0	188 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR52M1	Q8NGK5	317 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR13J1	Q8NGT2	312 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CDKN2AIPNL	Q96HQ2	116 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SLC45A3	Q96JT2	553 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GPR137	Q96N19	417 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR2M4	Q96R27	311 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SLC32A1	Q9H598	525 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ELOVL6	Q9H5J4	265 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	POLR1B	Q9H9Y6	1135 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	POLE4	Q9NR33	117 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MAP10	Q9P2G4	905 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MAGEL2	Q9UJ55	1249 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	PLXNB3	Q9ULL4	1909 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	C2orf92	A0A1B0GVN3	265 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	NEMP2	A6NFY4	417 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	PRPF4	O43172	522 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	5e-17	■■■■■ 29.7
BRCA1-222	ENST00000493919	PLIN3	O60664	434 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	MLYCD	O95822	493 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CHRNG	P07510	517 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ADORA3	P0DMS8	318 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ALPPL2	P10696	532 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	IVD	P26440	423 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	BDKRB2	P30411	391 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	SPR	P35270	261 aa	Predicted RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	AHR	P35869	848 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	RPL21	P46778	160 aa	Known RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	NOVA1	P51513	510 aa	Known RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	NUDT6	P53370	316 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CDKL1	Q00532	357 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GTF2H3	Q13889	308 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	FRMPD2B	Q6IN97	320 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	PSAPL1	Q6NUJ1	521 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	AFTPH	Q6ULP2	937 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	DET1	Q7L5Y6	550 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CXXC5	Q7LFL8	322 aa	Known RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	CHST15	Q7LFX5	561 aa	Predicted RBP	10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	GCNT2	Q8N0V5	402 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	VWA5B2	Q8N398	1253 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	LRRC18	Q8N456	261 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	C9orf62	Q8N4C0	152 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR4C15	Q8NGM1	316 aa		10.88	□□□□□ -0.67
BRCA1-222	ENST00000493919	OR13C2	Q8NGS9	318 aa		10.88	□□□□□ -0.67

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