RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RAG2P55895 527 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 GFPT1Q06210 699 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 EGFEM1PQ0D2K5 195 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 PVRIGQ6DKI7 326 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 OR5M10Q6IEU7 315 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 PNCKQ6P2M8 343 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 C1orf186Q6ZWK4 172 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 P4HA3Q7Z4N8 544 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 TGIF2LYQ8IUE0 185 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 NFAM1Q8NET5 270 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 VPS39Q96JC1 886 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 SLC35E1Q96K37 410 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 SMIM14Q96QK8 99 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF184Q99676 751 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 MYOZ2Q9NPC6 264 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 ONECUT1Q9UBC0 465 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 IGHV7-81A0A0B4J1V7 117 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 H3BMH7 237 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 CHRNA1P02708 482 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 PROS1P07225 676 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 AHCYP23526 432 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 SRYQ05066 204 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 SNX1Q13596 522 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 TMEM184AQ6ZMB5 413 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 SERPINA9Q86WD7 417 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 IFNEQ86WN2 208 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 C17orf82Q86X59 251 aaPredicted RBP2.76□□□□□ -1.97
ITGB1-216ENST00000493758 URGCPQ8TCY9 931 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 PLEKHF1Q96S99 279 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 FEM1AQ9BSK4 669 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 CCSER1Q9C0I3 900 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 NACA2Q9H009 215 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 NDUFA13Q9P0J0 144 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 ANKMY1Q9P2S6 941 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 SPRR3Q9UBC9 169 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 GHRLQ9UBU3 117 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF221Q9UK13 617 aa2.76□□□□□ -1.97
ITGB1-216ENST00000493758 SAMD4AQ9UPU9 718 aaKnown RBP2.76□□□□□ -1.97
ITGB1-216ENST00000493758 TTC26A0AVF1 554 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 TRIM3O75382 744 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 HMOX1P09601 288 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 CD1EP15812 388 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 GCFC2P16383 781 aaKnown RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF45Q02386 682 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 FUT7Q11130 342 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 BTG3Q14201 252 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 ELAVL3Q14576 367 aaKnown RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 TEX44Q53QW1 395 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 BEND6Q5SZJ8 279 aaPredicted RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 CELF3Q5SZQ8 465 aaKnown RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 BTNL3Q6UXE8 466 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 IL34Q6ZMJ4 242 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 FRA10AC1Q70Z53 315 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 TMEM179BQ7Z7N9 219 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 ERI1Q8IV48 349 aaKnown RBP2.75□□□□□ -1.97
ITGB1-216ENST00000493758 BPIFB2Q8N4F0 458 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 CCDC71LQ8N9Z2 235 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 OR52E1Q8NGJ3 308 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 RNF138Q8WVD3 245 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 ARNTL2Q8WYA1 636 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 FGGYQ96C11 551 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 ATG10Q9H0Y0 220 aa2.75□□□□□ -1.97
ITGB1-216ENST00000493758 RNF222A6NCQ9 220 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 DHRS7CA6NNS2 312 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 ADAM12O43184 909 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 PPIHO43447 177 aaKnown RBP2.74□□□□□ -1.97
ITGB1-216ENST00000493758 ZBTB14O43829 449 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 CCDC166P0CW27 439 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 VDRP11473 427 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 CDH5P33151 784 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-216ENST00000493758 PLOD1Q02809 727 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-216ENST00000493758 PDIA5Q14554 519 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 KCNJ11Q14654 390 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 CARTPTQ16568 116 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF658BQ4V348 819 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-216ENST00000493758 NEK5Q6P3R8 708 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 TRPM8Q7Z2W7 1104 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 TAF8Q7Z7C8 310 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 NEK11Q8NG66 645 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 ATP6V0A1Q93050 837 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 MCHR2Q969V1 340 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 NCLNQ969V3 563 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 TMEM186Q96B77 213 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 DHTKD1Q96HY7 919 aaPredicted RBP2.74□□□□□ -1.97
ITGB1-216ENST00000493758 IL4I1Q96RQ9 567 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 NMNAT2Q9BZQ4 307 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 IL19Q9UHD0 177 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 PPIAL4AQ9Y536 164 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 USP16Q9Y5T5 823 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 SLCO1B1Q9Y6L6 691 aa2.74□□□□□ -1.97
ITGB1-216ENST00000493758 ARHGAP42A6NI28 874 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 E9PLD3 99 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 KERAO60938 352 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF254O75437 659 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 H2AFXP16104 143 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-216ENST00000493758 HLA-DPA1P20036 260 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 PRDX2P32119 198 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 RPL4P36578 427 aaKnown RBP2.73□□□□□ -1.97
ITGB1-216ENST00000493758 OR3A4PP47883 348 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 STARP49675 285 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms