RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DSCR4P56555 118 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 HBA1P69905 142 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 POU6F2P78424 691 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OCRLQ01968 901 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 C17orf67Q0P5P2 114 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 LASP1Q14847 261 aaKnown RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 DPY19L1Q2PZI1 675 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 EIPR1Q53HC9 387 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TTMPQ5BVD1 217 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 NHSL2Q5HYW2 709 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 WIPI1Q5MNZ9 446 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OR5M10Q6IEU7 315 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OR4F3Q6IEY1 312 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 B3GNT6Q6ZMB0 384 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 YRDCQ86U90 279 aaKnown RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 COX18Q8N8Q8 333 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SLC16A11Q8NCK7 471 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 FAM83FQ8NEG4 500 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OR4K17Q8NGC6 315 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OR8J2Q8NGG1 315 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 OR10Q1Q8NGQ4 319 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 FAM110BQ8TC76 370 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SFXN5Q8TD22 340 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 CA5BP1Q8WTZ4 195 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 NUDT8Q8WV74 236 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 RNF138Q8WVD3 245 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 ABTB1Q969K4 478 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TESCQ96BS2 214 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SDCCAG3Q96C92 435 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 GIMAP5Q96F15 307 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 RMND5BQ96G75 393 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 STACQ99469 402 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 ZBTB18Q99592 522 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TIMP4Q99727 224 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SH3GL2Q99962 352 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TTYH2Q9BSA4 534 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 BTBD2Q9BX70 525 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 ACTRT3Q9BYD9 372 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TBL1XR1Q9BZK7 514 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 ACBD3Q9H3P7 528 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 PIGUQ9H490 435 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 WDR55Q9H6Y2 383 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 CXorf36Q9H7Y0 433 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 PTGES2Q9H7Z7 377 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 NEUROD4Q9HD90 331 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 DUSP22Q9NRW4 184 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SIRT3Q9NTG7 399 aaPredicted RBP6.36□□□□□ -1.39
TOP3A-207ENST00000493648 AIG1Q9NVV5 245 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 GIN1Q9NXP7 522 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 PPP4R1LQ9P1A2 415 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SPRR3Q9UBC9 169 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 TNFRSF10DQ9UBN6 386 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 DKKL1Q9UK85 242 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 SLC6A5Q9Y345 797 aa6.36□□□□□ -1.39
TOP3A-207ENST00000493648 PHF3Q92576 2039 aaKnown RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 USP9XQ93008 2570 aaPredicted RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 ANKRD28O15084 1053 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 NDUFB5O43674 189 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 SLC22A3O75751 556 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 TGDSO95455 350 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 CPSF4O95639 269 aaKnown RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 ANGPTL1O95841 491 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 EPPINO95925 133 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 IGKV1D-16P01601 117 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 GLI4P10075 376 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 IDO1P14902 403 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 BMP7P18075 431 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 ENDOUP21128 410 aaKnown RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 ATP6V1C1P21283 382 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 TBXA2RP21731 343 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 MATN1P21941 496 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 UQCRC2P22695 453 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 DPP4P27487 766 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 COL8A1P27658 744 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 HTR1EP28566 365 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 CHRNB4P30926 498 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 S100A3P33764 101 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 SOAT1P35610 550 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 GAS1P54826 345 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 NME5P56597 212 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 WNT3P56703 355 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 NUP107P57740 925 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 UFM1P61960 85 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 PPP2R2AP63151 447 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 CRYZQ08257 329 aaKnown RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 LRRC74AQ0VAA2 488 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 DUSP5Q16690 384 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 GSTA3Q16772 222 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 ZNF630Q2M218 657 aaPredicted RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 GRAMD1BQ3KR37 738 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 FAM174BQ3ZCQ3 159 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 SLC9B1Q4ZJI4 515 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
TOP3A-207ENST00000493648 C1orf185Q5T7R7 199 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 VASNQ6EMK4 673 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 CDC73Q6P1J9 531 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 AAGABQ6PD74 315 aa6.35□□□□□ -1.39
TOP3A-207ENST00000493648 FIGNL1Q6PIW4 674 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms