RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CLEC4AQ9UMR7 237 aa12.7□□□□□ -0.38
PRPF40A-211ENST00000493468 TNPO3Q9Y5L0 923 aaKnown RBP12.7□□□□□ -0.38
PRPF40A-211ENST00000493468 IGLV3-32A0A0A0MS00 114 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FAM234BA2RU67 622 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 EIF1AYO14602 144 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 TUBBP07437 444 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 PYGBP11216 843 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 GFAPP14136 432 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 CRABP2P29373 138 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 AGTR1P30556 359 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 SPRP35270 261 aaPredicted RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 EIF1AXP47813 144 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 NUDT6P53370 316 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 TRA2BP62995 288 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 TAB1Q15750 504 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 PFKFB4Q16877 469 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 CYB5R2Q6BCY4 276 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 ZBED8Q8IZ13 594 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 OR10D3Q8NH80 312 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 UHMK1Q8TAS1 419 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 PIWIL2Q8TC59 973 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 TM4SF18Q96CE8 201 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 ADAD1Q96M93 576 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 POTEKPQ9BYX7 375 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FOLH1BQ9HBA9 442 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FAM120CQ9NX05 1096 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 XPR1Q9UBH6 696 aa12.69□□□□□ -0.38
PRPF40A-211ENST00000493468 FAM159BA6NKW6 160 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 ADAMDEC1O15204 470 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 PLOD3O60568 738 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 PGRP06401 933 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 GALNT1Q10472 559 aaPredicted RBP12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 SFRP5Q5T4F7 317 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 PPP4R4Q6NUP7 873 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 CMC1Q7Z7K0 106 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 SLC44A2Q8IWA5 706 aaPredicted RBP12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 SAMD14Q8IZD0 417 aaPredicted RBP12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 RTN4RQ9BZR6 473 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 ANKRA2Q9H9E1 313 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 TAS2R9Q9NYW1 312 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 B3GALT5Q9Y2C3 310 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 OR10H1Q9Y4A9 318 aa12.68□□□□□ -0.38
PRPF40A-211ENST00000493468 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 UBFD1O14562 309 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 OR7A17O14581 309 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 LMX1BO60663 402 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 SYNGR4O95473 234 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 IGHV4-31P0DP07 118 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 ZNF16P17020 682 aaPredicted RBP12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 IL32P24001 234 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 SSTR1P30872 391 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 PSG6Q00889 435 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 IFT88Q13099 833 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 STX5Q13190 355 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GGTA1PQ4G0N0 100 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 CYP27C1Q4G0S4 372 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GRTP1Q5TC63 336 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GTF2IRD2BQ6EKJ0 949 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 TFAP2EQ6VUC0 442 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 SSX8Q7RTT4 187 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GALNT10Q86SR1 603 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GTF2IRD2Q86UP8 949 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 WDR75Q8IWA0 830 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 CENPLQ8N0S6 344 aaPredicted RBP12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 OR4N2Q8NGD1 307 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 DUSP19Q8WTR2 217 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 PYROXD1Q8WU10 500 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 NXNL1Q96CM4 212 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 CDK15Q96Q40 435 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 HBEGFQ99075 208 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 NOL11Q9H8H0 719 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
PRPF40A-211ENST00000493468 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 C7orf72A4D263 438 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 DPRXA6NFQ7 191 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 GOLGA8RI6L899 631 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 CTAGE8P0CG41 777 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 IGFBP5P24593 272 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 ALDH9A1P49189 494 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 CLK3P49761 638 aaKnown RBP12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 SRSF2Q01130 221 aaKnown RBP12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 DR1Q01658 176 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 P2RY6Q15077 328 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 LGSNQ5TDP6 509 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 LIPNQ5VXI9 398 aa12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
PRPF40A-211ENST00000493468 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms