RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CD300LDQ6UXZ3 194 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 C15orf54Q8N8G6 183 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 RTL3Q8N8U3 475 aaKnown RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 RELL2Q8NC24 303 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 TMEM185AQ8NFB2 350 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 CSGALNACT1Q8TDX6 532 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 SMIM4Q8WVI0 70 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 FDXACB1Q9BRP7 624 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 TINF2Q9BSI4 451 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 TMED9Q9BVK6 235 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 SEC11CQ9BY50 192 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 NT5MQ9NPB1 228 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 UXTQ9UBK9 157 aaPredicted RBP9.12□□□□□ -0.95
VPS8-225ENST00000492449 ASH2LQ9UBL3 628 aa9.12□□□□□ -0.95
VPS8-225ENST00000492449 PLXNB2O15031 1838 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 PRODHO43272 600 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 NIPSNAP2O75323 286 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ZNF44P15621 663 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TYRP1P17643 537 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 DRD5P21918 477 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 IDSP22304 550 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 NOS3P29474 1203 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 AQP1P29972 269 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 CCND3P30281 292 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 SOX18P35713 384 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TSPAN7P41732 249 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SLC1A3P43003 542 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 OAZ1P54368 228 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 DLX5P56178 289 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 GMFBP60983 142 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 RAB8AP61006 207 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 UBE2IP63279 158 aaKnown RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 LRRC74AQ0VAA2 488 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 CHAF1BQ13112 559 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 MPPED2Q15777 294 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SSX2Q16385 188 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 GGTA1PQ4G0N0 100 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 POMGNT2Q8NAT1 580 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 REPS2Q8NFH8 660 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 HASPINQ8TF76 798 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SMAP2Q8WU79 429 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 TCTEX1D2Q8WW35 142 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 MAL2Q969L2 176 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ZBED3Q96IU2 234 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 GPR20Q99678 358 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 JAM3Q9BX67 310 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TM6SF2Q9BZW4 377 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TMEM38AQ9H6F2 299 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TLR8Q9NR97 1041 aaKnown RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 GDE1Q9NZC3 331 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 CAMK2AQ9UQM7 478 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SLC45A1Q9Y2W3 748 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 MCM3APO60318 1980 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 FAAHO00519 579 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 RDH16O75452 317 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SLC34A2O95436 690 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 PDYNP01213 254 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 GJB1P08034 283 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TXNP10599 105 aaKnown RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 AMD1P17707 334 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ARF4P18085 180 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 RCC1P18754 421 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 CCR9P51686 369 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 RAB33AQ14088 237 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ZNF792Q3KQV3 632 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 C9orf152Q5JTZ5 239 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 SFXN4Q6P4A7 337 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 TAC4Q86UU9 113 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ZNF561Q8N587 486 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 MEIOBQ8N635 442 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 FBXO15Q8NCQ5 510 aaPredicted RBP9.11□□□□□ -0.95
VPS8-225ENST00000492449 THAP4Q8WY91 577 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 ZDHHC5Q9C0B5 715 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 PPP4R1LQ9P1A2 415 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 FLVCR2Q9UPI3 526 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 CBY1Q9Y3M2 126 aa9.11□□□□□ -0.95
VPS8-225ENST00000492449 A0A0G2JK05 382 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 C2orf92A0A1B0GVN3 265 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 LOC730098B7Z3J9 87 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 RFXAPO00287 272 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 PIRO00625 290 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 PPIHO43447 177 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 TLX2O43763 284 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 SPDEFO95238 335 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 SERPIND1P05546 499 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 SAGP10523 405 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 GKP32189 559 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 RAD52P43351 418 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 CSNK1EP49674 416 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 PPIAP62937 165 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 ITKQ08881 620 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 MELKQ14680 651 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 PEA15Q15121 130 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 DNLZQ5SXM8 178 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 MARC1Q5VT66 337 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 CAMKMTQ7Z624 323 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms