RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 NAXEQ8NCW5 288 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 MBD3L2Q8NHZ7 208 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 GIMAP5Q96F15 307 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 SFXN2Q96NB2 322 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 ZIM3Q96PE6 472 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 PRPF18Q99633 342 aaKnown RBP24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 C1orf50Q9BV19 199 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 MCCC2Q9HCC0 563 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 ATAD3AQ9NVI7 634 aa24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 EIF3LQ9Y262 564 aaKnown RBP24.61■■□□□ 1.53
SH3GL3-204ENST00000492099 A0A1W2PRB8 838 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 GXYLT2A0PJZ3 443 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 ZIC3O60481 467 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 ZWINTO95229 277 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 MYZAPP0CAP1 466 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 CAPN3P20807 821 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 BMP5P22003 454 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 WNT3P56703 355 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 ABCE1P61221 599 aaKnown RBP24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 MAD2L1Q13257 205 aaPredicted RBP24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 CPTPQ5TA50 214 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 OR7A2PQ8NGA2 310 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 PIK3R3Q92569 461 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 SLC9A6Q92581 669 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 LRRC46Q96FV0 321 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 RMND5BQ96G75 393 aaPredicted RBP24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 DSN1Q9H410 356 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 PTGES2Q9H7Z7 377 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 FLRT3Q9NZU0 649 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 KCNN3Q9UGI6 736 aa24.6■■□□□ 1.53
SH3GL3-204ENST00000492099 H0Y3Z8 333 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 ITM2AO43736 263 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 UTS2O95399 124 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 DHRS4L1P0CG22 281 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 PRPS1L1P21108 318 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 SRYQ05066 204 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 GANABQ14697 944 aaKnown RBP24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 PTGR1Q14914 329 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 CES4AQ5XG92 561 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 OR2M3Q8NG83 312 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 PGM2Q96G03 612 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 TUBA1CQ9BQE3 449 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 TBL1XR1Q9BZK7 514 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 HHATLQ9HCP6 504 aa24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.59■■□□□ 1.53
SH3GL3-204ENST00000492099 B4DXG7 233 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 SYT5O00445 386 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 LAMP1P11279 417 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 EFNA1P20827 205 aaPredicted RBP24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 PEX19P40855 299 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 PRIM2P49643 509 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 STARP49675 285 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 LHX2P50458 406 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 ZNF136P52737 540 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 STX5Q13190 355 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 BCL2A1Q16548 175 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 SMU1Q2TAY7 513 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 MFSD12Q6NUT3 480 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 MARCH3Q86UD3 253 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 KIRREL3Q8IZU9 778 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 RELL2Q8NC24 303 aaPredicted RBP24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 DUSP19Q8WTR2 217 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 OR5P2Q8WZ92 322 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 COQ8BQ96D53 544 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 UCN2Q96RP3 112 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 KCNK9Q9NPC2 374 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 MED11Q9P086 117 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 RPH3AQ9Y2J0 694 aaPredicted RBP24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 RAP2CQ9Y3L5 183 aa24.58■■□□□ 1.53
SH3GL3-204ENST00000492099 C17orf51A8MQB3 221 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 IGKV1D-16P01601 117 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ALOX5P09917 674 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ACP2P11117 423 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 CTSSP25774 331 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ASCL1P50553 236 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 EMX2Q04743 252 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 C17orf67Q0P5P2 114 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 LSM12Q3MHD2 195 aaKnown RBP24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ADGRE4PQ86SQ3 457 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ZNF781Q8N8C0 355 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 SLC16A11Q8NCK7 471 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 FAM120BQ96EK7 910 aaKnown RBP24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 TM9SF2Q99805 663 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ZNF559Q9BR84 538 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 RTN4RQ9BZR6 473 aa24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 SIRT3Q9NTG7 399 aaPredicted RBP24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 ZCCHC3Q9NUD5 404 aaKnown RBP24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 NOP53Q9NZM5 478 aaKnown RBP24.57■■□□□ 1.52
SH3GL3-204ENST00000492099 MED12Q93074 2177 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 ANGPTL1O95841 491 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 ZNF708P17019 499 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 HK1P19367 917 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 LCN1P31025 176 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 OPRM1P35372 400 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 DLX5P56178 289 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 GRAMD1BQ3KR37 738 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 POMZP3Q6PJE2 187 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 ARSKQ6UWY0 536 aa24.56■■□□□ 1.52
SH3GL3-204ENST00000492099 PSMA8Q8TAA3 256 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms