RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SDHAF3Q9NRP4 125 aa16.3■□□□□ 0.2
HMGN1-219ENST00000491183 FAM120CQ9NX05 1096 aaKnown RBP16.3■□□□□ 0.2
HMGN1-219ENST00000491183 NTMQ9P121 344 aa16.3■□□□□ 0.2
HMGN1-219ENST00000491183 CLCF1Q9UBD9 225 aa16.3■□□□□ 0.2
HMGN1-219ENST00000491183 ABCG2Q9UNQ0 655 aa16.3■□□□□ 0.2
HMGN1-219ENST00000491183 CCDC168Q8NDH2 2452 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 FAM221AA4D161 298 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 TTC36A6NLP5 189 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 TYROBPO43914 113 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 NKX2-2O95096 273 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 EFNA1P20827 205 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 RFX3P48380 749 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 PRKAG1P54619 331 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 MANFP55145 182 aaKnown RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 STX5Q13190 355 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 BCL2A1Q16548 175 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 XKR7Q5GH72 579 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 NUP43Q8NFH3 380 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 WNT2BQ93097 391 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 DTNBP1Q96EV8 351 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 ZBED6CLQ96FA7 236 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 TMEM109Q9BVC6 243 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 ACSS1Q9NUB1 689 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 ZDHHC2Q9UIJ5 367 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 FOXD3Q9UJU5 478 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 MRTO4Q9UKD2 239 aaKnown RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 V9GYY5 206 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 MPDZO75970 2070 aa16.29■□□□□ 0.2
HMGN1-219ENST00000491183 ANKRD17O75179 2603 aaKnown RBP16.29■□□□□ 0.2
HMGN1-219ENST00000491183 AKAP9Q99996 3911 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 PEX11AO75192 247 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 UTS2O95399 124 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 BPGMP07738 259 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 ACP2P11117 423 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 PEX19P40855 299 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 ETV4P43268 484 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 ASMTP46597 345 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 CLDN15P56746 228 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 GRAMD1BQ3KR37 738 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 HOMEZQ8IX15 550 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 CEP70Q8NHQ1 597 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 ZFP28Q8NHY6 868 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 GPR151Q8TDV0 419 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 NUDT8Q8WV74 236 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 MTERF3Q96E29 417 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 LRRC46Q96FV0 321 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-219ENST00000491183 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 C3orf14Q9HBI5 128 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 DNAJB12Q9NXW2 375 aaKnown RBP16.28■□□□□ 0.2
HMGN1-219ENST00000491183 ATP6V1HQ9UI12 483 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 SPG11Q96JI7 2443 aa16.28■□□□□ 0.2
HMGN1-219ENST00000491183 EEF1E1-BLOC1S5C9J1V9 151 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 EEF1E1O43324 174 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 HCRTR2O43614 444 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 KCNH1O95259 989 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 SLU7O95391 586 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 TGM6O95932 706 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 HK1P19367 917 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 PSMD4P55036 377 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 FLYWCH1Q4VC44 716 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 EXOSC6Q5RKV6 272 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 CDRT4Q8N9R6 151 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 SLC16A11Q8NCK7 471 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 OR7A2PQ8NGA2 310 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 OR5M1Q8NGP8 315 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 OR4C3Q8NH37 302 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 FAM110BQ8TC76 370 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 FAM222BQ8WU58 562 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 SLC9A6Q92581 669 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 INTS12Q96CB8 462 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 C16orf58Q96GQ5 468 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 ZFP3Q96NJ6 502 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 GPATCH1Q9BRR8 931 aaKnown RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 RASSF1Q9NS23 344 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 SIRT3Q9NTG7 399 aaPredicted RBP16.27■□□□□ 0.2
HMGN1-219ENST00000491183 FBXO34Q9NWN3 711 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 ZNF337Q9Y3M9 751 aa16.27■□□□□ 0.2
HMGN1-219ENST00000491183 TEP1Q99973 2627 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 IGLV3-32A0A0A0MS00 114 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 H0YC42 278 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 EMC8O43402 210 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 ANGPTL1O95841 491 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 PEPDP12955 493 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 DNAJA1P31689 397 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 SERPINB5P36952 375 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 CLK3P49761 638 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 SUCLG1P53597 346 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 TPD52P55327 224 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 PRR5P85299 388 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 C17orf67Q0P5P2 114 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 MLC1Q15049 377 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 DUSP5Q16690 384 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 C6orf136Q5SQH8 315 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 MFSD12Q6NUT3 480 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 LRIG3Q6UXM1 1119 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 R3HCC1LQ7Z5L2 792 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 ZAR1Q86SH2 424 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms