RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 TMEM114B3SHH9 223 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 SCAMP2O15127 329 aaKnown RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 SEC14L5O43304 696 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 FADS1O60427 444 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PEX11AO75192 247 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 UTS2O95399 124 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 IGKV1D-16P01601 117 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 FGF4P08620 206 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 IFI6P09912 130 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PRPS2P11908 318 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 BCKDHAP12694 445 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 HK1P19367 917 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 POU3F2P20265 443 aaPredicted RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 MAPK1P28482 360 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 OPRM1P35372 400 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 ASMTP46597 345 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PSMD4P55036 377 aaKnown RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 DSCR4P56555 118 aaPredicted RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 B3GALT5-AS1P59052 145 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 FOXF2Q12947 444 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PTGR1Q14914 329 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 GRAMD1BQ3KR37 738 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 KRT71Q3SY84 523 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 XKR7Q5GH72 579 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 GRAMD2AQ8IUY3 354 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 UBQLNLQ8IYU4 475 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 GCNT2Q8N0V5 402 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 FADS6Q8N9I5 356 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 OR5M1Q8NGP8 315 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 SLC9A6Q92581 669 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 JADE3Q92613 823 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 GIMAP5Q96F15 307 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 PPP3R2Q96LZ3 170 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 TM9SF2Q99805 663 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 GPATCH1Q9BRR8 931 aaKnown RBP9.38□□□□□ -0.91
RBM39-236ENST00000490484 TBL1XR1Q9BZK7 514 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 C3orf14Q9HBI5 128 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 MED11Q9P086 117 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 CLCF1Q9UBD9 225 aa9.38□□□□□ -0.91
RBM39-236ENST00000490484 H3BML4 177 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 SYT5O00445 386 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 TYROBPO43914 113 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 ZIC3O60481 467 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 TBX19O60806 448 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 BPGMP07738 259 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 ACP2P11117 423 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 CHMP24386 653 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 SERPINB5P36952 375 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 PEX19P40855 299 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 FRKP42685 505 aaPredicted RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 CPA2P48052 419 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 CLK3P49761 638 aaKnown RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 GANABQ14697 944 aaKnown RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 DUSP5Q16690 384 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 VPS26BQ4G0F5 336 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 FLYWCH1Q4VC44 716 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 MFSD12Q6NUT3 480 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 P4HA3Q7Z4N8 544 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 R3HCC1LQ7Z5L2 792 aaKnown RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 ADGRE4PQ86SQ3 457 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 LUZP2Q86TE4 346 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 CDRT4Q8N9R6 151 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 GATSQ8NAP1 163 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 FNDC5Q8NAU1 212 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 NUP43Q8NFH3 380 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 OR7A2PQ8NGA2 310 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 PPP1R14CQ8TAE6 165 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 DUSP19Q8WTR2 217 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 SMPDL3BQ92485 455 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 ZBTB9Q96C00 473 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 INTS12Q96CB8 462 aaKnown RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 C1GALT1C1Q96EU7 318 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 C3orf30Q96M34 536 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 YIPF4Q9BSR8 244 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 SFXN3Q9BWM7 321 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 ACSS1Q9NUB1 689 aaPredicted RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 ZDHHC2Q9UIJ5 367 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 MRPS18CQ9Y3D5 142 aaKnown RBP9.37□□□□□ -0.91
RBM39-236ENST00000490484 SNX8Q9Y5X2 465 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
RBM39-236ENST00000490484 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 TUBAL3A6NHL2 446 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 SLC22A20A6NK97 555 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 TTC36A6NLP5 189 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 H0YC42 278 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 RGS16O15492 202 aaPredicted RBP9.36□□□□□ -0.91
RBM39-236ENST00000490484 EMC8O43402 210 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 HCRTR2O43614 444 aa9.36□□□□□ -0.91
RBM39-236ENST00000490484 LYPLA1O75608 230 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms