RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 DUXAA6NLW8 204 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 POLR3GO15318 223 aaPredicted RBP15.82■□□□□ 0.12
MDC1-206ENST00000489540 CPSF4O95639 269 aaKnown RBP15.82■□□□□ 0.12
MDC1-206ENST00000489540 IGKV1D-16P01601 117 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 IL6P05231 212 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 PGRP06401 933 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 UQCRC2P22695 453 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 IL12AP29459 219 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 TRPC1P48995 793 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 SMSP52788 366 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 POU6F2P78424 691 aaPredicted RBP15.82■□□□□ 0.12
MDC1-206ENST00000489540 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 WLSQ5T9L3 541 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 TMEM211Q6ICI0 200 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 C6orf120Q7Z4R8 191 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 ANKRD46Q86W74 232 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 ARFGAP2Q8N6H7 521 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 OR5AK3PQ8NH89 298 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 PHF10Q8WUB8 498 aaKnown RBP15.82■□□□□ 0.12
MDC1-206ENST00000489540 CCDC115Q96NT0 180 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 SLC6A15Q9H2J7 730 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 TCF7L2Q9NQB0 619 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 SERHLQ9NQF3 203 aa15.82■□□□□ 0.12
MDC1-206ENST00000489540 ADAM10O14672 748 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 NGFRP08138 427 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 HOXD4P09016 255 aaPredicted RBP15.81■□□□□ 0.12
MDC1-206ENST00000489540 ENDOUP21128 410 aaKnown RBP15.81■□□□□ 0.12
MDC1-206ENST00000489540 MATN1P21941 496 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 GCKP35557 465 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 IDH3AP50213 366 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 DGKQP52824 942 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 AQP5P55064 265 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 EMC4Q5J8M3 183 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 FIGNL1Q6PIW4 674 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 GOT1L1Q8NHS2 421 aaPredicted RBP15.81■□□□□ 0.12
MDC1-206ENST00000489540 OR52E6Q96RD3 313 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 CCDC28BQ9BUN5 200 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 TBL1XR1Q9BZK7 514 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 PNPLA3Q9NST1 481 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 FLRT3Q9NZU0 649 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 PPP4R1LQ9P1A2 415 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 SPRR3Q9UBC9 169 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 MRPS18CQ9Y3D5 142 aaKnown RBP15.81■□□□□ 0.12
MDC1-206ENST00000489540 HRH3Q9Y5N1 445 aa15.81■□□□□ 0.12
MDC1-206ENST00000489540 C15orf38-AP3S2A0A0A6YYH1 394 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 RNF103-CHMP3A0A140T963 221 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 FIGNL2A6NMB9 653 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 ATP8B1O43520 1251 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 SCO2O43819 266 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 ATP6V1C1P21283 382 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 TBXA2RP21731 343 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 SRD5A2P31213 254 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 GRAMD1BQ3KR37 738 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 EIPR1Q53HC9 387 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 NHSL2Q5HYW2 709 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 OR5M10Q6IEU7 315 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 XKRXQ6PP77 449 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 C3P1Q6ZMU1 363 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 MARCH3Q86UD3 253 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 MIER2Q8N344 545 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 ZNF808Q8N4W9 903 aaPredicted RBP15.8■□□□□ 0.12
MDC1-206ENST00000489540 TRIML2Q8N7C3 387 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 FAM83FQ8NEG4 500 aaPredicted RBP15.8■□□□□ 0.12
MDC1-206ENST00000489540 OR4K17Q8NGC6 315 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 OR5M9Q8NGP3 310 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 CDS1Q92903 461 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 OTUB1Q96FW1 271 aaPredicted RBP15.8■□□□□ 0.12
MDC1-206ENST00000489540 MARK4Q96L34 752 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 DMRTA2Q96SC8 542 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 HOXD1Q9GZZ0 328 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 UBQLN4Q9NRR5 601 aa15.8■□□□□ 0.12
MDC1-206ENST00000489540 ALG1L2C9J202 215 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 WDR1O75083 606 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 GABRA1P14867 456 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 HPGDP15428 266 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 AGAP20933 346 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 MRPL19P49406 292 aaKnown RBP15.79■□□□□ 0.12
MDC1-206ENST00000489540 STX1BP61266 288 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 IRX1P78414 480 aaPredicted RBP15.79■□□□□ 0.12
MDC1-206ENST00000489540 C17orf67Q0P5P2 114 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 WIPI1Q5MNZ9 446 aaPredicted RBP15.79■□□□□ 0.12
MDC1-206ENST00000489540 VASNQ6EMK4 673 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 ZNF585AQ6P3V2 769 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 MRGPRGQ86SM5 289 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 YRDCQ86U90 279 aaKnown RBP15.79■□□□□ 0.12
MDC1-206ENST00000489540 OR4C3Q8NH37 302 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 OR14L1PQ8NHC6 308 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 MIPOL1Q8TD10 442 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 DUSP19Q8WTR2 217 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 ITLN2Q8WWU7 325 aaPredicted RBP15.79■□□□□ 0.12
MDC1-206ENST00000489540 STON2Q8WXE9 905 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 OR7D2Q96RA2 312 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 PANX1Q96RD7 426 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 OR2B2Q9GZK3 357 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 PTGES2Q9H7Z7 377 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 MED4Q9NPJ6 270 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 TAS2R10Q9NYW0 307 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 FBXL2Q9UKC9 423 aa15.79■□□□□ 0.12
MDC1-206ENST00000489540 NINQ8N4C6 2090 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 CCDC154A6NI56 674 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms