RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 HMGN4O00479 90 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 ADAM10O14672 748 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 ANGPT2O15123 496 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 SNX3O60493 162 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 TRIM3O75382 744 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 GLSO94925 669 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 CELA3AP09093 270 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 RFPL3SP0C7P2 107 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 ZCCHC18P0CG32 403 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 MAGEA5P43359 124 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 PSMD4P55036 377 aaKnown RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 HSF1Q00613 529 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 MRPL49Q13405 166 aaKnown RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 C16orf62Q7Z3J2 963 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 TMEM251Q8N6I4 163 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 FAM110BQ8TC76 370 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 RNF138Q8WVD3 245 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 RTN4RQ9BZR6 473 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 IL1RL2Q9HB29 575 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 LEF1Q9UJU2 399 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 PCDHB14Q9Y5E9 798 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 LIPGQ9Y5X9 500 aa13.18□□□□□ -0.3
HLA-F-229ENST00000489502 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-229ENST00000489502 DNAJC13O75165 2243 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 SNPHO15079 494 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ZNHIT1O43257 154 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 FADS1O60427 444 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 CDC40O60508 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 UNC5CO95185 931 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 SNRPB2P08579 225 aaKnown RBP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 FREM3P0C091 2139 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ETFAP13804 333 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 GNLYP22749 145 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 MVDP53602 400 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ESPL1Q14674 2120 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 SLC30A6Q6NXT4 461 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 DHDDSQ86SQ9 333 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 MARCH3Q86UD3 253 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 SLC22A16Q86VW1 577 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 GATSQ8NAP1 163 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 CHDHQ8NE62 594 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 OR52N2Q8NGI0 321 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 XAGE5Q8WWM1 108 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 NTNG2Q96CW9 530 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 TMEM41AQ96HV5 264 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 GPR137Q96N19 417 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 DEFB127Q9H1M4 99 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ZFP64Q9NPA5 681 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 VAPAQ9P0L0 249 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-229ENST00000489502 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 C15orf41Q9Y2V0 281 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 NDUFAF1Q9Y375 327 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 FLNCQ14315 2725 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 HIVEP3Q5T1R4 2406 aa13.17□□□□□ -0.3
HLA-F-229ENST00000489502 POLEQ07864 2286 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 MED12Q93074 2177 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 TRBV5-3A0A0A0MS03 114 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 B4DXG7 233 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 J3QKU1 62 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 FBP2O00757 339 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 ASNA1O43681 348 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 SNX4O95219 450 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 KRT75O95678 551 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 EDN3P14138 238 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 GDF1P27539 372 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 DCTP40126 519 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 GAS1P54826 345 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 SNTA1Q13424 505 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 ATAD3BQ5T9A4 648 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 OR5M10Q6IEU7 315 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 HEPHL1Q6MZM0 1159 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 GFRALQ6UXV0 394 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 APOOLQ6UXV4 268 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 HMGN2P46Q86SG4 172 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 MTDHQ86UE4 582 aaKnown RBP13.16□□□□□ -0.3
HLA-F-229ENST00000489502 ATCAYQ86WG3 371 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 SPPL2CQ8IUH8 684 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 FAM109AQ8N4B1 249 aa13.16□□□□□ -0.3
HLA-F-229ENST00000489502 POU5F2Q8N7G0 328 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms