RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ERVK-6Q9BXR3 956 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 HDHD5Q9BXW7 423 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 IL22Q9GZX6 179 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 IQCGQ9H095 443 aaKnown RBP10.37□□□□□ -0.75
TRIM56-204ENST00000487252 LRMDAQ9H2I8 198 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 GALNT9Q9HCQ5 603 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 NPHS2Q9NP85 383 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 PRDM7Q9NQW5 492 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 MED29Q9NX70 200 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 DCDC2Q9UHG0 476 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ERVK-19Q9WJR5 959 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 PSAT1Q9Y617 370 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 C2orf92A0A1B0GVN3 265 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 H0YC42 278 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 GOLGA8TH3BQL2 631 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 LINC01387J3KSC0 135 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PFDN6O15212 129 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 DYRK3O43781 588 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PLIN3O60664 434 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 HNRNPCL1O60812 293 aaKnown RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 GCM2O75603 506 aaPredicted RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 VAPBO95292 243 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PROCP04070 461 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 C8GP07360 202 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 T-ENOLP0DO92 83 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PEPDP12955 493 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ABCD3P28288 659 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 SPRP35270 261 aaPredicted RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 SUCLG1P53597 346 aaKnown RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PLA2G16P53816 162 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 CDH11P55287 796 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 TPD52P55327 224 aaPredicted RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 EEFSECP57772 596 aaKnown RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 BST1Q10588 318 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 FOXL1Q12952 345 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PON3Q15166 354 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 RBBP5Q15291 538 aaKnown RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ZSWIM7Q19AV6 140 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 TEDDM1Q5T9Z0 273 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ALKBH2Q6NS38 261 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 NXPE4Q6UWF7 544 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 CPNE9Q8IYJ1 553 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 C17orf47Q8NEP4 570 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 OR6Y1Q8NGX8 325 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF669Q96BR6 464 aaPredicted RBP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 C3orf49Q96BT1 292 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 ERP27Q96DN0 273 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 TSNARE1Q96NA8 513 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 OSBPL11Q9BXB4 747 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 METTL7AQ9H8H3 244 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRIM56-204ENST00000487252 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 SLC17A6Q9P2U8 582 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 EMC9Q9Y3B6 208 aa10.36□□□□□ -0.75
TRIM56-204ENST00000487252 B4DXG7 233 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 SS18L1O75177 396 aaPredicted RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 HKR1P10072 659 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 NAGAP17050 411 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 PDLIM4P50479 330 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 IRF9Q00978 393 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 PLIN5Q00G26 463 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 KRT72Q14CN4 511 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 P2RY6Q15077 328 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 DESI1Q6ICB0 168 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 TBC1D1Q86TI0 1168 aaPredicted RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 PLCZ1Q86YW0 608 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 NUDCD3Q8IVD9 361 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 CNTN4Q8IWV2 1026 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 OR4N5Q8IXE1 308 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 GALNT12Q8IXK2 581 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 ST13P4Q8IZP2 240 aaPredicted RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 GABRG1Q8N1C3 465 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 MUC15Q8N387 334 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 KLHL29Q96CT2 875 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 THOC1Q96FV9 657 aaKnown RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 GMPPAQ96IJ6 420 aaPredicted RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 FOXN4Q96NZ1 517 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 BTBD9Q96Q07 612 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 NODALQ96S42 347 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 GPR21Q99679 349 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 MAPKAP1Q9BPZ7 522 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 SIKE1Q9BRV8 207 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 REXO4Q9GZR2 422 aaKnown RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 INTS10Q9NVR2 710 aaKnown RBP10.35□□□□□ -0.75
TRIM56-204ENST00000487252 ARL15Q9NXU5 204 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 FBXL2Q9UKC9 423 aa10.35□□□□□ -0.75
TRIM56-204ENST00000487252 E7EQL1 145 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 CLEC3AO75596 197 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 PPM1BO75688 479 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 FCGR2AP12318 317 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 GSTM2P28161 218 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 KCNC1P48547 511 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms