RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DCAF1Q9Y4B6 1507 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 A0A087WWV3 80 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 A0A1B0GWJ7 208 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF840PA6NDX5 716 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SAP18O00422 153 aaKnown RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SDHDO14521 159 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 NDC80O14777 642 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 CASKO14936 926 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 MAPK13O15264 365 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 PPIHO43447 177 aaKnown RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SRPX2O60687 465 aaPredicted RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF354AO60765 605 aaPredicted RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 RHBDL1O75783 438 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ANP32DO95626 131 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 IGFBP1P08833 259 aaPredicted RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 H2AFXP16104 143 aaPredicted RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SDC1P18827 310 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 HTR2AP28223 471 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 OR1D4P47884 311 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 IST1P53990 364 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 KLHL30Q0D2K2 578 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC10A1Q14973 349 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC22A6Q4U2R8 563 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 LGSNQ5TDP6 509 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 RNLSQ5VYX0 342 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 CBLN3Q6UW01 205 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 SERINC5Q86VE9 423 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 FADS6Q8N9I5 356 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 VN1R17PQ8TDU5 208 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 TSGA13Q96PP4 275 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 HCAR1Q9BXC0 346 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 NFKBIZQ9BYH8 718 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 COMMD4Q9H0A8 199 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 EXOSC3Q9NQT5 275 aaKnown RBP2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ELOVL2Q9NXB9 296 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 RDH8Q9NYR8 311 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ATP6V0A2Q9Y487 856 aa2.72□□□□□ -1.97
SNRNP27-204ENST00000487029 ZSCAN5CA6NGD5 496 aaPredicted RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 EFCAB7A8K855 629 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 JAK2O60674 1132 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 PEX11AO75192 247 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 IDH1O75874 414 aaKnown RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 MFN2O95140 757 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 GJB5O95377 273 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 JCHAINP01591 159 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CHRNA1P02708 482 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 ALPIP09923 528 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 H2AFZP0C0S5 128 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CT45A10P0DMU9 189 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 ANXA3P12429 323 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 KIF5BP33176 963 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 ALDH3B2P48448 385 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 OVGP1Q12889 678 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 IL18R1Q13478 541 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 RUNX3Q13761 415 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CAMK4Q16566 473 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 MEDAGQ5VYS4 303 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 ASPHD2Q6ICH7 369 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 GCNT7Q6ZNI0 430 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CDC20BQ86Y33 519 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 MARCH9Q86YJ5 346 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 UNC5CLQ8IV45 518 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 OR10T2Q8NGX3 314 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 TFB1MQ8WVM0 346 aaKnown RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 DHTKD1Q96HY7 919 aaPredicted RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 FEM1AQ9BSK4 669 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 TPPP3Q9BW30 176 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 GSDMCQ9BYG8 508 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC25A51Q9H1U9 297 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 MEPEQ9NQ76 525 aaPredicted RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 RBM28Q9NW13 759 aaKnown RBP2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 LAMP5Q9UJQ1 280 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 BLOC1S6Q9UL45 172 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 DUSP12Q9UNI6 340 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CARMIL1Q5VZK9 1371 aa2.71□□□□□ -1.98
SNRNP27-204ENST00000487029 CCT8L1PA6NM43 557 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 G3V3Y1 287 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 CLDN5O00501 218 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC17A2O00624 439 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 ANGPT2O15123 496 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 BCL2L11O43521 198 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 DUX1O43812 170 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 STX11O75558 287 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 CSF2P04141 144 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 KRT8P05787 483 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 ASNSP08243 561 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 TSPY4P0CV99 314 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 TSPY10P0CW01 314 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 LAMP1P11279 417 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 BCKDHAP12694 445 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 KRT13P13646 458 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 IDSP22304 550 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 ACVR1BP36896 505 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 DLSTP36957 453 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 MAGEA9P43362 315 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 FNTAP49354 379 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 ACADVLP49748 655 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 PLOD1Q02809 727 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms