RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	CCDC116	Q8IYX3	515 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	PPM1N	Q8N819	430 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR4N2	Q8NGD1	307 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR5M1	Q8NGP8	315 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	ATP6V1E2	Q96A05	226 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	EFHD2	Q96C19	240 aa	Predicted RBP	11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	GPR78	Q96P69	363 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	PRRG4	Q9BZD6	226 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	RTN4R	Q9BZR6	473 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	BRF2	Q9HAW0	419 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	BARX1	Q9HBU1	254 aa	Predicted RBP	11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	TAS2R9	Q9NYW1	312 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	STOML1	Q9UBI4	398 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	UTS2R	Q9UKP6	389 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	SLC12A4	Q9UP95	1085 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	SNX24	Q9Y343	169 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	SNX8	Q9Y5X2	465 aa		11.11	□□□□□ -0.63
PABPC4-215	ENST00000484555	PCNX3	Q9H6A9	2034 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555		A0A096LNT2	108 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CCDC188	H7C350	402 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	SCO2	O43819	266 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	ADAM11	O75078	769 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	NME6	O75414	186 aa	Predicted RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	KLHL2	O95198	593 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	PLG	P00747	810 aa	Predicted RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CD3E	P07766	207 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CDKN1A	P38936	164 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	IRF9	Q00978	393 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	NAB1	Q13506	487 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	PGGHG	Q32M88	737 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	ZNF672	Q499Z4	452 aa	Predicted RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CYP27C1	Q4G0S4	372 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	C6orf52	Q5T4I8	152 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	STK32C	Q86UX6	486 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CREG2	Q8IUH2	290 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR9A2	Q8NGT5	310 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	DUSP19	Q8WTR2	217 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	KAT2A	Q92830	837 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	ADGRG7	Q96K78	797 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	TACO1	Q9BSH4	297 aa	Known RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	ELOVL6	Q9H5J4	265 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	ESRP2	Q9H6T0	727 aa	Known RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	NGB	Q9NPG2	151 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	FAM120C	Q9NX05	1096 aa	Known RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CPSF2	Q9P2I0	782 aa	Known RBP	11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	CLEC4A	Q9UMR7	237 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR10H1	Q9Y4A9	318 aa		11.1	□□□□□ -0.63
PABPC4-215	ENST00000484555		A0A1W2PP18	115 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	STX16-NPEPL1	H3BU86	382 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	STX16	O14662	325 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	GPRIN2	O60269	458 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	NDUFS7	O75251	213 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	CD8A	P01732	235 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	FES	P07332	822 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	ZNF17	P17021	662 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	ARL1	P40616	181 aa	Predicted RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	EIF1AX	P47813	144 aa	Known RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	ALDH9A1	P49189	494 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	C17orf67	Q0P5P2	114 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	DTX2	Q86UW9	622 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	GABRG1	Q8N1C3	465 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR10H5	Q8NGA6	315 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	OR4F6	Q8NGB9	312 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	HSD17B8	Q92506	261 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	NEUROG1	Q92886	237 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	S100PBP	Q96BU1	408 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	MTBP	Q96DY7	904 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	USB1	Q9BQ65	265 aa	Known RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	RHNO1	Q9BSD3	238 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	SHCBP1L	Q9BZQ2	653 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	AMBRA1	Q9C0C7	1298 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	FARSB	Q9NSD9	589 aa	Known RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	NMRK1	Q9NWW6	199 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	LPAR3	Q9UBY5	353 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	PCTP	Q9UKL6	214 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	MCTS1	Q9ULC4	181 aa	Known RBP	11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	TMCO1	Q9UM00	188 aa		11.09	□□□□□ -0.63
PABPC4-215	ENST00000484555	HMX2	A2RU54	273 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	EIF1AY	O14602	144 aa	Known RBP	11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	ADAMDEC1	O15204	470 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	GCM2	O75603	506 aa	Predicted RBP	11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	IL33	O95760	270 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	PDYN	P01213	254 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	TUBB	P07437	444 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	ADH6	P28332	368 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	AGTR1	P30556	359 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	CLK3	P49761	638 aa	Known RBP	11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	VLDLR	P98155	873 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	LOXL1	Q08397	574 aa	Predicted RBP	11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	STX5	Q13190	355 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	NRF1	Q16656	503 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	TMEM249	Q2WGJ8	235 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	TECRL	Q5HYJ1	363 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	TEX35	Q5T0J7	233 aa		11.08	□□□□□ -0.64
PABPC4-215	ENST00000484555	SFRP5	Q5T4F7	317 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms