RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OR10D3Q8NH80 312 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 UHMK1Q8TAS1 419 aaKnown RBP9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 DUSP19Q8WTR2 217 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 KCTD4Q8WVF5 259 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 ADGRG7Q96K78 797 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 OSBPL9Q96SU4 736 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 NPAS1Q99742 590 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 CPNE1Q99829 537 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 PLA2G12AQ9BZM1 189 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 ALG2Q9H553 416 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 MANSC1Q9H8J5 431 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 FANCFQ9NPI8 374 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 FBXO34Q9NWN3 711 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 CISD1Q9NZ45 108 aaKnown RBP9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 JRKLQ9Y4A0 524 aa9.68□□□□□ -0.86
SMARCC1-205ENST00000483847 MGAM2Q2M2H8 2515 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 FREM1Q5H8C1 2179 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TGP01266 2768 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ELOA3DA6NLF2 546 aaPredicted RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 SHISA9B4DS77 424 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 UBFD1O14562 309 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 CXCL13O43927 109 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 LMX1BO60663 402 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 SEC31AO94979 1220 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 CLDN9O95484 217 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 LTA4HP09960 611 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 GFAPP14136 432 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 GP5P40197 560 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 C21orf58P58505 322 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 GALNT1Q10472 559 aaPredicted RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ILF2Q12905 390 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 NRF1Q16656 503 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ELOA3BQ3SY89 546 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 SGO1Q5FBB7 561 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 SH2D4BQ5SQS7 431 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 FRG2Q64ET8 278 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 CYB5R2Q6BCY4 276 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 PAGE2Q7Z2X7 111 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TBC1D1Q86TI0 1168 aaPredicted RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 MARCH3Q86UD3 253 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 STK32CQ86UX6 486 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 CENPLQ8N0S6 344 aaPredicted RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF525Q8N782 197 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ELOA3Q8NG57 546 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 PIWIL2Q8TC59 973 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF675Q8TD23 568 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TRPC4APQ8TEL6 797 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 FRG2BQ96QU4 278 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 HBEGFQ99075 208 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 PTGES2Q9H7Z7 377 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 NOL11Q9H8H0 719 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 CHODLQ9H9P2 273 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 FARSBQ9NSD9 589 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 AHSPQ9NZD4 102 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TXNDC16Q9P2K2 825 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 XPR1Q9UBH6 696 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ACOT9Q9Y305 439 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 OR10H1Q9Y4A9 318 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF780BQ9Y6R6 833 aa9.67□□□□□ -0.86
SMARCC1-205ENST00000483847 TCRBV9S1A1TA0A576 114 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 FAM159BA6NKW6 160 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 KCNAB3O43448 404 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 SPRY1O43609 319 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 GUCY1B2O75343 617 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 TUBBP07437 444 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 IL32P24001 234 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 ARL1P40616 181 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 ALDH18A1P54886 795 aaKnown RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 MRPS22P82650 360 aaKnown RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 PSG6Q00889 435 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 GLYR1Q49A26 553 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 FAM120AOSQ5T036 256 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 SFRP5Q5T4F7 317 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 CLEC2AQ6UVW9 174 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 APOOLQ6UXV4 268 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 TFAP2EQ6VUC0 442 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 NUFIP2Q7Z417 695 aaKnown RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 GAS2L3Q86XJ1 694 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 KLHL7Q8IXQ5 586 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 CEP112Q8N8E3 955 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 OR7G2Q8NG99 324 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 HSD17B8Q92506 261 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 CACNG6Q9BXT2 260 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 TMEM185BQ9H7F4 350 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 NGBQ9NPG2 151 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 PFDN4Q9NQP4 134 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 SDHAF3Q9NRP4 125 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 UTS2RQ9UKP6 389 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 PSME2Q9UL46 239 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 MCTS1Q9ULC4 181 aaKnown RBP9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 SLC12A4Q9UP95 1085 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 PLCE1Q9P212 2302 aa9.66□□□□□ -0.86
SMARCC1-205ENST00000483847 PKD1L1Q8TDX9 2849 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 A0A0J9YW62 118 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 SYCE1LA8MT33 242 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms