RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 PPP1R16AQ96I34 528 aa6.68□□□□□ -1.34
CUL3-209ENST00000481135 THUMPD2Q9BTF0 503 aaKnown RBP6.68□□□□□ -1.34
CUL3-209ENST00000481135 ZNF416Q9BWM5 594 aa6.68□□□□□ -1.34
CUL3-209ENST00000481135 LIN28AQ9H9Z2 209 aaKnown RBP6.68□□□□□ -1.34
CUL3-209ENST00000481135 DPM3Q9P2X0 92 aa6.68□□□□□ -1.34
CUL3-209ENST00000481135 GMPPBQ9Y5P6 360 aa6.68□□□□□ -1.34
CUL3-209ENST00000481135 USP6P35125 1406 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 HCFC1P51610 2035 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 A0A1B0GUL7 405 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 K7EPI3 171 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 GPAA1O43292 621 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 LANCL1O43813 399 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 MFN2O95140 757 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 JCHAINP01591 159 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 HEXBP07686 556 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 IDSP22304 550 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 CYLC1P35663 651 aaPredicted RBP6.67□□□□□ -1.34
CUL3-209ENST00000481135 PLOD1Q02809 727 aaPredicted RBP6.67□□□□□ -1.34
CUL3-209ENST00000481135 CYP51A1Q16850 503 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 NAXDQ8IW45 347 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 GPD1LQ8N335 351 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 MRPL13Q9BYD1 178 aaKnown RBP6.67□□□□□ -1.34
CUL3-209ENST00000481135 GSDMCQ9BYG8 508 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 ELOVL4Q9GZR5 314 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 COQ10BQ9H8M1 238 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 AGPAT5Q9NUQ2 364 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 MFHAS1Q9Y4C4 1052 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 MMP24Q9Y5R2 645 aa6.67□□□□□ -1.34
CUL3-209ENST00000481135 SLC17A2O00624 439 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 MAPK13O15264 365 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 JAK2O60674 1132 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 THY1P04216 161 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 ANXA3P12429 323 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 SLC25A1P53007 311 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 RIPPLY2Q5TAB7 128 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 ZNF573Q86YE8 665 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 TEX9Q8N6V9 391 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 SLC25A51Q9H1U9 297 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 GPN2Q9H9Y4 310 aaPredicted RBP6.66□□□□□ -1.34
CUL3-209ENST00000481135 EHFQ9NZC4 300 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 ABCD2Q9UBJ2 740 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 AP1M2Q9Y6Q5 423 aa6.66□□□□□ -1.34
CUL3-209ENST00000481135 SMPD2O60906 423 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 TRIM3O75382 744 aaPredicted RBP6.65□□□□□ -1.34
CUL3-209ENST00000481135 STX11O75558 287 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 IDH1O75874 414 aaKnown RBP6.65□□□□□ -1.34
CUL3-209ENST00000481135 CSF2P04141 144 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 PSMA2P25787 234 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 HTR2AP28223 471 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 XCR1P46094 333 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 SPINK14Q6IE38 97 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 VITQ6UXI7 678 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 IFNEQ86WN2 208 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 HSCBQ8IWL3 235 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 ZSCAN4Q8NAM6 433 aaPredicted RBP6.65□□□□□ -1.34
CUL3-209ENST00000481135 SDSLQ96GA7 329 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 RANBP9Q96S59 729 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 SLC30A2Q9BRI3 323 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 ZNF107Q9UII5 783 aaPredicted RBP6.65□□□□□ -1.34
CUL3-209ENST00000481135 CRLS1Q9UJA2 301 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 DUSP12Q9UNI6 340 aa6.65□□□□□ -1.34
CUL3-209ENST00000481135 ERI2A8K979 691 aaKnown RBP6.64□□□□□ -1.35
CUL3-209ENST00000481135 SLC2A10O95528 541 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 PTMSP20962 102 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 CDH5P33151 784 aaPredicted RBP6.64□□□□□ -1.35
CUL3-209ENST00000481135 PEX6Q13608 980 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 SERTAD2Q14140 314 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 ZNF239Q16600 458 aaKnown RBP6.64□□□□□ -1.35
CUL3-209ENST00000481135 Q6ZR54 194 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 HSD11B1LQ7Z5J1 315 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 BPIFB2Q8N4F0 458 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 AKR1E2Q96JD6 320 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 CCT8L2Q96SF2 557 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 MEPEQ9NQ76 525 aaPredicted RBP6.64□□□□□ -1.35
CUL3-209ENST00000481135 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 B9D1Q9UPM9 204 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
CUL3-209ENST00000481135 GNPDA1P46926 289 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
CUL3-209ENST00000481135 NTHL1P78549 312 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 BDH1Q02338 343 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 CD47Q08722 323 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 TGIF1Q15583 401 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 TPD52L1Q16890 204 aaPredicted RBP6.63□□□□□ -1.35
CUL3-209ENST00000481135 CBLN3Q6UW01 205 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 FADS6Q8N9I5 356 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 KLHL30-AS1Q8NEE0 82 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 SIGLEC12Q96PQ1 595 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 FARSBQ9NSD9 589 aaKnown RBP6.63□□□□□ -1.35
CUL3-209ENST00000481135 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.63□□□□□ -1.35
CUL3-209ENST00000481135 SLC2A6Q9UGQ3 507 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 CYTH4Q9UIA0 394 aa6.63□□□□□ -1.35
CUL3-209ENST00000481135 CLDN5O00501 218 aa6.62□□□□□ -1.35
CUL3-209ENST00000481135 SDHDO14521 159 aa6.62□□□□□ -1.35
CUL3-209ENST00000481135 DUSP14O95147 198 aaKnown RBP6.62□□□□□ -1.35
CUL3-209ENST00000481135 HPDP32754 393 aaPredicted RBP6.62□□□□□ -1.35
CUL3-209ENST00000481135 ACAA2P42765 397 aaKnown RBP6.62□□□□□ -1.35
CUL3-209ENST00000481135 NUCB2P80303 420 aa6.62□□□□□ -1.35
CUL3-209ENST00000481135 QRICH1Q2TAL8 776 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms