RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.08■□□□□ 0.48
LIME1-205ENST00000480139 PRRC2CQ9Y520 2896 aaKnown RBP18.08■□□□□ 0.48
LIME1-205ENST00000480139 SHANK1Q9Y566 2161 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 G3V3Y1 287 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 HMGN4O00479 90 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 FADS1O60427 444 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 OR12D1P0DN82 309 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 RFX3P48380 749 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 BICRALQ6AI39 1079 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 PACS2Q86VP3 889 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 ANKS4BQ8N8V4 417 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 AURKBQ96GD4 344 aaPredicted RBP18.07■□□□□ 0.48
LIME1-205ENST00000480139 ZNF597Q96LX8 424 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 SDF2Q99470 211 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 TTTY12Q9BZ98 90 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 ZFP64Q9NPA5 681 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 THUMPD1Q9NXG2 353 aaKnown RBP18.07■□□□□ 0.48
LIME1-205ENST00000480139 VAPAQ9P0L0 249 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 ARMCX1Q9P291 453 aa18.07■□□□□ 0.48
LIME1-205ENST00000480139 LRRC3CA6NJW4 275 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ACOT7O00154 380 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 CLIC1O00299 241 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 FBP2O00757 339 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 UTS2O95399 124 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 NPPAP01160 153 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ATP6V1C1P21283 382 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 TBXA2RP21731 343 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ELAVL4P26378 380 aaKnown RBP18.06■□□□□ 0.48
LIME1-205ENST00000480139 TDGF1P3P51864 188 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 CASP9P55211 416 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ALDH6A1Q02252 535 aaKnown RBP18.06■□□□□ 0.48
LIME1-205ENST00000480139 FADDQ13158 208 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 STX5Q13190 355 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 RNFT1Q5M7Z0 435 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 COX20Q5RI15 118 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 CCNJQ5T5M9 372 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 C16orf62Q7Z3J2 963 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 DHDDSQ86SQ9 333 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ZNF605Q86T29 641 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 SLC22A16Q86VW1 577 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 SIAH3Q8IW03 269 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 RP9Q8TA86 221 aaKnown RBP18.06■□□□□ 0.48
LIME1-205ENST00000480139 PNPT1Q8TCS8 783 aaKnown RBP18.06■□□□□ 0.48
LIME1-205ENST00000480139 XAGE5Q8WWM1 108 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 MIB2Q96AX9 1013 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ZNF350Q9GZX5 532 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 HOXD1Q9GZZ0 328 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 HHATLQ9HCP6 504 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 POLE3Q9NRF9 147 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 UBQLN4Q9NRR5 601 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 FBXO34Q9NWN3 711 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 CORO2BQ9UQ03 480 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 LIPT1Q9Y234 373 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 WIF1Q9Y5W5 379 aa18.06■□□□□ 0.48
LIME1-205ENST00000480139 ADAM10O14672 748 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 UNC5CO95185 931 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 BMP2P12643 396 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 CLK3P49761 638 aaKnown RBP18.05■□□□□ 0.48
LIME1-205ENST00000480139 GAS1P54826 345 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 PLGLB1Q02325 96 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 CYLC2Q14093 348 aaPredicted RBP18.05■□□□□ 0.48
LIME1-205ENST00000480139 GRAMD1BQ3KR37 738 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
LIME1-205ENST00000480139 GKAP1Q5VSY0 366 aaPredicted RBP18.05■□□□□ 0.48
LIME1-205ENST00000480139 FNDC7Q5VTL7 733 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 ZAR1Q86SH2 424 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 SNX32Q86XE0 403 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 OIT3Q8WWZ8 545 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 RAB8BQ92930 207 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 ZNF703Q9H7S9 590 aaPredicted RBP18.05■□□□□ 0.48
LIME1-205ENST00000480139 GALNT9Q9HCQ5 603 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 QPCTLQ9NXS2 382 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 FLRT3Q9NZU0 649 aa18.05■□□□□ 0.48
LIME1-205ENST00000480139 NINQ8N4C6 2090 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 A0A1W2PQD3 144 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 ALG1L2C9J202 215 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 TFECO14948 347 aaPredicted RBP18.04■□□□□ 0.48
LIME1-205ENST00000480139 SNPHO15079 494 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 STX11O75558 287 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 DCTN3O75935 186 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 OXSR1O95747 527 aaPredicted RBP18.04■□□□□ 0.48
LIME1-205ENST00000480139 EDN3P14138 238 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 MST1P26927 711 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 CRATP43155 626 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 MASP1P48740 699 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 DSTNP60981 165 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 FUT5Q11128 374 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 NFYCQ13952 458 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 RGNQ15493 299 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 TRMT5Q32P41 509 aaKnown RBP18.04■□□□□ 0.48
LIME1-205ENST00000480139 FLYWCH1Q4VC44 716 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 TIGD3Q6B0B8 471 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 REP15Q6BDI9 236 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 GALNT10Q86SR1 603 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 FAM109AQ8N4B1 249 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 ZNF527Q8NB42 609 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 OR4C3Q8NH37 302 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 ROPN1LQ96C74 230 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 TRNT1Q96Q11 434 aaKnown RBP18.04■□□□□ 0.48
LIME1-205ENST00000480139 CGREF1Q99674 301 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms