RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 PGDP52209 483 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 PRKAG1P54619 331 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 EMP2P54851 167 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 POLE2P56282 527 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 GABREP78334 506 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 MVKQ03426 396 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 RBBP4Q09028 425 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 FUT5Q11128 374 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ZNF267Q14586 743 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 NSDHLQ15738 373 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 MAPK11Q15759 364 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ZNF630Q2M218 657 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 VMACQ2NL98 169 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 FAM69BQ5VUD6 431 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 MLIPQ5VWP3 458 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 CDC73Q6P1J9 531 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 FAM199XQ6PEV8 388 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 TMEM205Q6UW68 189 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 TIPARPQ7Z3E1 657 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 ANKRD37Q7Z713 158 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 DHFR2Q86XF0 187 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 GALNT15Q8N3T1 639 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ENDOVQ8N8Q3 282 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 C11orf65Q8NCR3 313 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 BVESQ8NE79 360 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 TNIP2Q8NFZ5 429 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OR7G1Q8NGA0 311 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OR52R1Q8NGF1 315 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OR5D16Q8NGK9 328 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OR2Y1Q8NGV0 311 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OR14A16Q8NHC5 309 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 CT55Q8WUE5 264 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 PTPMT1Q8WUK0 201 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 JADE3Q92613 823 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 HOXB13Q92826 284 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 MAL2Q969L2 176 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 OTUB1Q96FW1 271 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 C16orf58Q96GQ5 468 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 RBM18Q96H35 190 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 FBXL20Q96IG2 436 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ZNF578Q96N58 590 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 OR7D2Q96RA2 312 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 MESP1Q9BRJ9 268 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 CRB3Q9BUF7 120 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 CNPPD1Q9BV87 410 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ACTRT3Q9BYD9 372 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 TRIM15Q9C019 465 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 POLR1BQ9H9Y6 1135 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 FOLH1BQ9HBA9 442 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 EQTNQ9NQ60 294 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 PNO1Q9NRX1 252 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 P2RX2Q9UBL9 471 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 FAF1Q9UNN5 650 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 ERVK-19Q9WJR5 959 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 LOC102723996A0A087X1L8 192 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 TCRBV5S2A0A599 114 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 TCRBV3S1A0A5B6 114 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 SAGE2PA6NJ88 616 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 AQP12BA6NM10 295 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 A8MUA0 341 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CDRT15L2A8MXV6 281 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CXCR6O00574 342 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 GSTA4O15217 222 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 KLF4O43474 513 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 MGRN1O60291 552 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 BRINP1O60477 761 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 RAD1O60671 282 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ENTPD5O75356 428 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 KLF7O75840 302 aaPredicted RBP6.16□□□□□ -1.42
USP48-208ENST00000479177 BCHEP06276 602 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 INHBBP09529 407 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 RAB40ALP0C0E4 278 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 OR12D1P0DN82 309 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 MATN1P21941 496 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CD82P27701 267 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 PLA2G5P39877 138 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 FOLR3P41439 243 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 PRIM2P49643 509 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 EMDP50402 254 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ERFP50548 548 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CRYBA2P53672 197 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 SLC37A1P57057 533 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CDK6Q00534 326 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 SCARB2Q14108 478 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 VEZF1Q14119 521 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 DUSP5Q16690 384 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 SFT2D3Q587I9 215 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 MTX3Q5HYI7 312 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 FAAH2Q6GMR7 532 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 HEPHL1Q6MZM0 1159 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ZCCHC12Q6PEW1 402 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 CYP2R1Q6VVX0 501 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 WDR53Q7Z5U6 358 aaPredicted RBP6.16□□□□□ -1.42
USP48-208ENST00000479177 PROSER1Q86XN7 944 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 SLC30A8Q8IWU4 369 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 AQP12AQ8IXF9 295 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ADGRG5Q8IZF4 528 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ESX1Q8N693 406 aa6.16□□□□□ -1.42
USP48-208ENST00000479177 ZNF321PQ8N8H1 164 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms