RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PANX1Q96RD7 426 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 MYLK2Q9H1R3 596 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 GLIPR2Q9H4G4 154 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 ACSS1Q9NUB1 689 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 TMEM45AQ9NWC5 275 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 B4GALT7Q9UBV7 327 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 BCAP29Q9UHQ4 241 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 LEF1Q9UJU2 399 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 ERVK-19Q9WJR5 959 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 TRIM64A6NGJ6 449 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 TRIM64BA6NI03 449 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 BBIP1A8MTZ0 92 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 MYO1GB0I1T2 1018 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 FAM47E-STBD1D6RA91 191 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 RFXANKO14593 260 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 PDE9AO76083 593 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 ATP1B1P05026 303 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 EPXP11678 715 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 CHI3L1P36222 383 aaPredicted RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 RFC3P40938 356 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 MC3RP41968 323 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 IGLV3-21P80748 117 aaPredicted RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 ZNF155Q12901 538 aaPredicted RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 RTL6Q6ICC9 239 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 BLOC1S3Q6QNY0 202 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 MSANTD1Q6ZTZ1 278 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 SULF2Q8IWU5 870 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 OR52N2Q8NGI0 321 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 OR5P2Q8WZ92 322 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 COQ8BQ96D53 544 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 CMTM5Q96DZ9 223 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 C3orf14Q9HBI5 128 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.28
USP11-207ENST00000478596 TAS2R7Q9NYW3 318 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.29□□□□□ -0.28
USP11-207ENST00000478596 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
USP11-207ENST00000478596 RNF103-CHMP3A0A140T963 221 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 PRSS51A0A1B0GVH4 220 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 OR14I1A6ND48 311 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 MRASO14807 208 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 COQ9O75208 318 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 CDK9P50750 372 aaKnown RBP13.28□□□□□ -0.28
USP11-207ENST00000478596 PRKAG1P54619 331 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 MRPS35P82673 323 aaKnown RBP13.28□□□□□ -0.28
USP11-207ENST00000478596 PRR5P85299 388 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 DUSP2Q05923 314 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 STX5Q13190 355 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 TP53BP2Q13625 1128 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 NFYCQ13952 458 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 PRSS53Q2L4Q9 553 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 FBXL19-AS1Q494R0 122 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 REP15Q6BDI9 236 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 SLC2A7Q6PXP3 512 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 RNF111Q6ZNA4 994 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 RPS19BP1Q86WX3 136 aaKnown RBP13.28□□□□□ -0.28
USP11-207ENST00000478596 OR5AK3PQ8NH89 298 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 SLC2A12Q8TD20 617 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 JADE3Q92613 823 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 RNASE6Q93091 150 aaKnown RBP13.28□□□□□ -0.28
USP11-207ENST00000478596 LRRC46Q96FV0 321 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 IL1RL2Q9HB29 575 aa13.28□□□□□ -0.28
USP11-207ENST00000478596 ZCCHC3Q9NUD5 404 aaKnown RBP13.28□□□□□ -0.28
USP11-207ENST00000478596 CHD3Q12873 2000 aaKnown RBP13.27□□□□□ -0.28
USP11-207ENST00000478596 TRBV11-1A0A0K0K1C0 115 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 LOC100653049A0A140TA62 436 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 HAX1O00165 279 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 BCKDKO14874 412 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 PEX1O43933 1283 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 SMPD2O60906 423 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 KRT34O76011 436 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 SLITRK5O94991 958 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 KCNH1O95259 989 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 COX4I1P13073 169 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 NUDT2P50583 147 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 HLCSP50747 726 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 NR0B1P51843 470 aaKnown RBP13.27□□□□□ -0.29
USP11-207ENST00000478596 EXOSC7Q15024 291 aaKnown RBP13.27□□□□□ -0.29
USP11-207ENST00000478596 TERF2Q15554 542 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 MPEG1Q2M385 716 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 SPRED3Q2MJR0 410 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 HLA-DQA1Q5Y7H0 255 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 FAM111BQ6SJ93 734 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 ZNF621Q6ZSS3 439 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
USP11-207ENST00000478596 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 FUNDC1Q8IVP5 155 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 PCYOX1LQ8NBM8 494 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 B3GNT7Q8NFL0 401 aa13.27□□□□□ -0.29
USP11-207ENST00000478596 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms