RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RNASET2O00584 256 aaKnown RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 SCN2BO60939 215 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 CBR3O75828 277 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 KCNK2O95069 426 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 IL12AP29459 219 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 SMSP52788 366 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 CLNS1AP54105 237 aaKnown RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 WIPI1Q5MNZ9 446 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 WLSQ5T9L3 541 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 ZAR1Q86SH2 424 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 CLEC4FQ8N1N0 589 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 ZNF808Q8N4W9 903 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 COX18Q8N8Q8 333 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FAM83FQ8NEG4 500 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FAM110BQ8TC76 370 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 SFXN5Q8TD22 340 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 ACTRT2Q8TDY3 377 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 CHMP6Q96FZ7 201 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 MARK4Q96L34 752 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 C7orf26Q96N11 449 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 OR52B2Q96RD2 323 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 RTN4RQ9BZR6 473 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 INTS9Q9NV88 658 aaKnown RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 GPATCH2Q9NW75 528 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FBXO34Q9NWN3 711 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FAM120CQ9NX05 1096 aaKnown RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 ALKBH4Q9NXW9 302 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 FAF1Q9UNN5 650 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-206ENST00000478214 ABCG2Q9UNQ0 655 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 GPR45Q9Y5Y3 372 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 USH1CQ9Y6N9 552 aa14.2□□□□□ -0.14
HMGA1-206ENST00000478214 PRSS51A0A1B0GVH4 220 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 FIGNL2A6NMB9 653 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 E9PBE3 544 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 DIAPH2O60879 1101 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 ACVR2AP27037 513 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 STX5Q13190 355 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 CDSNQ15517 529 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 GRAMD1BQ3KR37 738 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 FAM174BQ3ZCQ3 159 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 CCNJQ5T5M9 372 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 ANXA8L1Q5VT79 327 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 CDC73Q6P1J9 531 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 APOOLQ6UXV4 268 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 MARCH3Q86UD3 253 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 OR4A15Q8NGL6 344 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 CDS1Q92903 461 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 MOAP1Q96BY2 351 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 ACTRT3Q9BYD9 372 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 PIGUQ9H490 435 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 DUSP22Q9NRW4 184 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 PPP4R1LQ9P1A2 415 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 KCNE3Q9Y6H6 103 aa14.19□□□□□ -0.14
HMGA1-206ENST00000478214 RNF103-CHMP3A0A140T963 221 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 CYSRT1A8MQ03 144 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 CPSF4O95639 269 aaKnown RBP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 S100A3P33764 101 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 DGKQP52824 942 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 POU6F2P78424 691 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 CRYZQ08257 329 aaKnown RBP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 DPY19L1Q2PZI1 675 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 DCST1Q5T197 706 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 RTL6Q6ICC9 239 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 TMEM211Q6ICI0 200 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 XKRXQ6PP77 449 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 EPGNQ6UW88 154 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 C6orf120Q7Z4R8 191 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 VPS37AQ8NEZ2 397 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 OR4K17Q8NGC6 315 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 OR4C3Q8NH37 302 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 OR14L1PQ8NHC6 308 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 ADAMTS15Q8TE58 950 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 STACQ99469 402 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 TIMP4Q99727 224 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 BTBD2Q9BX70 525 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 TBL1XR1Q9BZK7 514 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 OR2B2Q9GZK3 357 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 DSN1Q9H410 356 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 ZNF446Q9NWS9 450 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 PCDHGB4Q9UN71 923 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 FAM215AQ9Y5M1 114 aa14.18□□□□□ -0.14
HMGA1-206ENST00000478214 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-206ENST00000478214 WDR1O75083 606 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 KRT16P08779 473 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 IDO1P14902 403 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 BMP7P18075 431 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 TCEA1P23193 301 aaKnown RBP14.17□□□□□ -0.14
HMGA1-206ENST00000478214 SRD5A2P31213 254 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 CLK3P49761 638 aaKnown RBP14.17□□□□□ -0.14
HMGA1-206ENST00000478214 NUP107P57740 925 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 PMPCAQ10713 525 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 ART3Q13508 389 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 NHSL2Q5HYW2 709 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 VASNQ6EMK4 673 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 BHLHB9Q6PI77 547 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 B3GNT6Q6ZMB0 384 aa14.17□□□□□ -0.14
HMGA1-206ENST00000478214 ULK2Q8IYT8 1036 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms