RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FAM109AQ8N4B1 249 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 PNPT1Q8TCS8 783 aaKnown RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 GNRHR2Q96P88 292 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SIKE1Q9BRV8 207 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 RTN4RQ9BZR6 473 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 OR51I1Q9H343 314 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 PIGUQ9H490 435 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SERHLQ9NQF3 203 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 DUSP22Q9NRW4 184 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 SLC6A13Q9NSD5 602 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 TNFRSF10DQ9UBN6 386 aa9.39□□□□□ -0.91
HDAC6-222ENST00000478095 MRTO4Q9UKD2 239 aaKnown RBP9.39□□□□□ -0.91
HDAC6-222ENST00000478095 NPIPA5A0A0B4J1W7 369 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TRGV8A0A0C4DH27 118 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 A0A1B0GTH9 108 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 NPIPA7E9PJI5 369 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 FADS1O60427 444 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ANP32DO95626 131 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 KRT16P08779 473 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 NPIPA8P0DM63 369 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 OR12D1P0DN82 309 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 CAPN3P20807 821 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TRPC1P48995 793 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 MRPL19P49406 292 aaKnown RBP9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ATP4BP51164 291 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ARFIP2P53365 341 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 SNTA1Q13424 505 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 RCAN2Q14206 197 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TOMM20Q15388 145 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.38□□□□□ -0.91
HDAC6-222ENST00000478095 HYAL4Q2M3T9 481 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 GRAMD1BQ3KR37 738 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 KRTCAP3Q53RY4 240 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 DCST2Q5T1A1 773 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 C1QL3Q5VWW1 255 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 SAXO2Q658L1 398 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 SLC30A6Q6NXT4 461 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 OLIG3Q7RTU3 272 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 FGD2Q7Z6J4 655 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 RNF130Q86XS8 419 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 SPPL2CQ8IUH8 684 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TRIML2Q8N7C3 387 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 GOT1L1Q8NHS2 421 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-222ENST00000478095 STON2Q8WXE9 905 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 RAB8BQ92930 207 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 AURKBQ96GD4 344 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF317Q96PQ6 595 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-222ENST00000478095 STACQ99469 402 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 BTBD2Q9BX70 525 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 FAM107BQ9H098 131 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF385DQ9H6B1 395 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 EXO5Q9H790 373 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 RMND5AQ9H871 391 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 ZDHHC11Q9H8X9 412 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 B4GALT7Q9UBV7 327 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 TRIM33Q9UPN9 1127 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 C15orf41Q9Y2V0 281 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 WIF1Q9Y5W5 379 aa9.38□□□□□ -0.91
HDAC6-222ENST00000478095 RELNP78509 3460 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 NBASA2RRP1 2371 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 B4DXG7 233 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ADAM10O14672 748 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 GMFGO60234 142 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 SLC19A2O60779 497 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 SEMA7AO75326 666 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TRAPPC6AO75865 159 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ZIC2O95409 532 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 OXSR1O95747 527 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ABOP16442 354 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ATP6V1C1P21283 382 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TCEA1P23193 301 aaKnown RBP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ELAVL4P26378 380 aaKnown RBP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 PTPN6P29350 595 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 KHKP50053 298 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 SEC24CP53992 1094 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 GAS1P54826 345 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 RBPJQ06330 500 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 LRRC74AQ0VAA2 488 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 C3AR1Q16581 482 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 COX20Q5RI15 118 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TIGD3Q6B0B8 471 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 TMEM81Q6P7N7 255 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 APOOLQ6UXV4 268 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 MSANTD1Q6ZTZ1 278 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 CHERPQ8IWX8 916 aaKnown RBP9.37□□□□□ -0.91
HDAC6-222ENST00000478095 WDSUB1Q8N9V3 476 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 OR1J4Q8NGS1 313 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 OR4C3Q8NH37 302 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 FAM110BQ8TC76 370 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 RNF138Q8WVD3 245 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 GTF2H4Q92759 462 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 NTNG2Q96CW9 530 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 SPDL1Q96EA4 605 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 NEURL3Q96EH8 262 aa9.37□□□□□ -0.91
HDAC6-222ENST00000478095 ITCHQ96J02 903 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms