RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GPC1P35052 558 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 RPS6KA3P51812 740 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 CDK5Q00535 292 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 IRF3Q14653 427 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 C6orf141Q5SZD1 244 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 TMEM205Q6UW68 189 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 GALNT12Q8IXK2 581 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 APCDD1LQ8NCL9 501 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 OR52P1PQ8NH57 321 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 RHOXF1Q8NHV9 184 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 DOK4Q8TEW6 326 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 GIPC3Q8TF64 312 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 MMABQ96EY8 250 aaPredicted RBP11.21□□□□□ -0.61
PRPF39-203ENST00000477626 LMF1Q96S06 567 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 SPSB2Q99619 263 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 FGF21Q9NSA1 209 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 RNF6Q9Y252 685 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 SOX30O94993 753 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 CHMP24386 653 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 ILKQ13418 452 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.62
PRPF39-203ENST00000477626 ZIK1Q3SY52 487 aaPredicted RBP11.21□□□□□ -0.62
PRPF39-203ENST00000477626 RBM48Q5RL73 367 aaKnown RBP11.21□□□□□ -0.62
PRPF39-203ENST00000477626 LYPD8Q6UX82 237 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 HMGN2P46Q86SG4 172 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 ARMC10Q8N2F6 343 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.62
PRPF39-203ENST00000477626 LRFN5Q96NI6 719 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 KLHDC3Q9BQ90 382 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 PRR14Q9BWN1 585 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 OR10A5Q9H207 317 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 OCIAD1Q9NX40 245 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 KNL1Q8NG31 2342 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 CELSR3Q9NYQ7 3312 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 TNFRSF10AO00220 468 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 TSPAN2O60636 221 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 SERPINB7O75635 380 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 ADAP00813 363 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 NGFRP08138 427 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 TBXA2RP21731 343 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 OR1D4P47884 311 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 AVPR1BP47901 424 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 CDH12P55289 794 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 THAP5Q7Z6K1 395 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 EID2Q8N6I1 236 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 BCORP1Q8N888 145 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 ALPK1Q96QP1 1244 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 RHNO1Q9BSD3 238 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 COL25A1Q9BXS0 654 aaPredicted RBP11.21□□□□□ -0.62
PRPF39-203ENST00000477626 RHCGQ9UBD6 479 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 CTSFQ9UBX1 484 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 IFT52Q9Y366 437 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 SH3GLB1Q9Y371 365 aa11.21□□□□□ -0.62
PRPF39-203ENST00000477626 GON4LQ3T8J9 2241 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 A0A087WUU8 490 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 LOC102723996A0A087X1L8 192 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 UGT2B11O75310 529 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 NR2F1P10589 423 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MMP11P24347 488 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 YAP1P46937 504 aaKnown RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 NUBP1P53384 320 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 RPP38P78345 283 aaKnown RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 SERTAD2Q14140 314 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 GANABQ14697 944 aaKnown RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 LIN52Q52LA3 116 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 ANGPTL8Q6UXH0 198 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 APOOLQ6UXV4 268 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 SATL1Q86VE3 508 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 LZICQ8WZA0 190 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 NAT6Q93015 286 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 TCEAL3Q969E4 200 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 EQTNQ9NQ60 294 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 SEC14L3Q9UDX4 400 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MYRFQ9Y2G1 1151 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 POFUT2Q9Y2G5 429 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MAU2Q9Y6X3 613 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 FRG2CA6NGY1 282 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 SLC1A7O00341 560 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 ANXA8P13928 327 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 TRA2AQ13595 282 aaKnown RBP eCLIP11.2□□□□□ -0.624e-10■□□□□ 9.3
PRPF39-203ENST00000477626 DECR1Q16698 335 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MEP1AQ16819 746 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 NADK2Q4G0N4 442 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 TTC23Q5W5X9 447 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 GDF7Q7Z4P5 450 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 METTL27Q8N6F8 245 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 NR4A3Q92570 626 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 SMOC1Q9H4F8 434 aa11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MKKSQ9NPJ1 570 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-203ENST00000477626 MKLN1Q9UL63 735 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms