RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 AKAP12Q02952 1782 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 MAGI1Q96QZ7 1491 aaPredicted RBP2.25□□□□□ -2.05
XRN1-211ENST00000477237 WRNQ14191 1432 aaPredicted RBP eCLIP2.25□□□□□ -2.05
XRN1-211ENST00000477237 MYOM3Q5VTT5 1437 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 POGZQ7Z3K3 1410 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 CTTNBP2Q8WZ74 1663 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 AK9Q5TCS8 1911 aa2.25□□□□□ -2.05
XRN1-211ENST00000477237 NID2Q14112 1375 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD36BQ8N2N9 1353 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DISP3Q9P2K9 1392 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NEURL4Q96JN8 1562 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ASTN2O75129 1339 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 NPHP3Q7Z494 1330 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PCNX3Q9H6A9 2034 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CASZ1Q86V15 1759 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ZNF608Q9ULD9 1512 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 A0A0A6YYH2 397 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GNG14A0A1W2PPG7 69 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PQLC2LA1A4F0 135 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR2A25A4D2G3 310 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CFAP73A6NFT4 308 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 A6NJ64 397 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ASB14A6NK59 587 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM90A7PA6NKC0 464 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 OR2AG2A6NM03 316 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 WASHC1A8K0Z3 465 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM90A22PA8MWA6 464 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM90A12PA8MX19 464 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 FAM90A23PA8MXZ1 464 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TCP11X1B4DZS4 312 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 WASH3PC4AMC7 463 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD65E5RJM6 399 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LRRN3E7EW58 273 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 K7EQM0 130 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD28O15084 1053 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SLC22A2O15244 555 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CHADO15335 359 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 KLK10O43240 276 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PSMD3O43242 534 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SPRY1O43609 319 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 LANCL1O43813 399 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 DFNA5O60443 496 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 EIF1BO60739 113 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 SNNO75324 88 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 NDUFS3O75489 264 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SCGB2A1O75556 95 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CCNKO75909 580 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NOL4O94818 638 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 RHOBTB1O94844 696 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NADKO95544 446 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 KRT75O95678 551 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 LDOC1O95751 146 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 MT-CYBP00156 380 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 PGK1P00558 417 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TSHBP01222 138 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 IFNA16P05015 189 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 HMBSP08397 361 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PLEKP08567 350 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 LINC00614P0C842 121 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GIMD1P0DJR0 217 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GFAPP14136 432 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 AREGP15514 252 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 XRCC1P18887 633 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 GNAZP19086 355 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 HNF1AP20823 631 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SAT1P21673 171 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MC5RP33032 325 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 BSGP35613 385 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GGT5P36269 586 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 TGFBR2P37173 567 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 EIF1P41567 113 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 GPD2P43304 727 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MAGEB1P43366 347 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 KCNJ1P48048 391 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NRIP1P48552 1158 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CAPZA1P52907 286 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CEBPGP53567 150 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SNU13P55769 128 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 DAOAP59103 153 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 UBE2G2P60604 165 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ERVS71-1P61550 626 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SNRPD1P62314 119 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 ARF6P62330 175 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 CSNK2A1P68400 391 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 MBTD1Q05BQ5 628 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 ACSM1Q08AH1 577 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SIGLEC14Q08ET2 396 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 MADCAM1Q13477 382 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 AQP6Q13520 282 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 EIF4EBP2Q13542 120 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 MVPQ14764 893 aaKnown RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 POU6F1Q14863 301 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 NAB2Q15742 525 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 GPR68Q15743 365 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 UAP1Q16222 522 aaPredicted RBP2.24□□□□□ -2.05
XRN1-211ENST00000477237 SLC15A2Q16348 729 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SSX2Q16385 188 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 SNAPC1Q16533 368 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 PCK2Q16822 640 aa2.24□□□□□ -2.05
XRN1-211ENST00000477237 USP41Q3LFD5 358 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms