RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TEAD1P28347 426 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CSF2RBP32927 897 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PIGAP37287 484 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 MMP12P39900 470 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CDX1P47902 265 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 GCLMP48507 274 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 SLC11A2P49281 568 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 INPP1P49441 399 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 RPL14P50914 215 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 VSX2P58304 361 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 TRA2BP62995 288 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 DYNLL1P63167 89 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 HSD11B2P80365 405 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CDK6Q00534 326 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 MC1RQ01726 317 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 NHLH1Q02575 133 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CHIT1Q13231 466 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CLINT1Q14677 625 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 UBXN2BQ14CS0 331 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 AGERQ15109 404 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 LINC01559Q495D7 138 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ARSJQ5FYB0 599 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 ZNF311Q5JNZ3 666 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 LEMD1Q68G75 181 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 KCTD11Q693B1 232 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 TBC1D3GQ6DHY5 549 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ZNF470Q6ECI4 717 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 MOXD1Q6UVY6 613 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PRSS57Q6UWY2 283 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ALKAL2Q6UX46 152 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 METTL7BQ6UX53 244 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 MRPL52Q86TS9 123 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 ANGPTL5Q86XS5 388 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 KATNAL2Q8IYT4 538 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 SLC34A3Q8N130 599 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CMTR1Q8N1G2 835 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 OR5D18Q8NGL1 313 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 OR5R1Q8NH85 324 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 C9orf43Q8TAL5 461 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 STT3BQ8TCJ2 826 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 FBXO17Q96EF6 278 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ZBED6CLQ96FA7 236 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 MASTLQ96GX5 879 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 KAZALD1Q96I82 304 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ZNF354BQ96LW1 612 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 PTCHD1Q96NR3 888 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 TMEM209Q96SK2 561 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 GINS4Q9BRT9 223 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 DDA1Q9BW61 102 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 JAM3Q9BX67 310 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 C1QTNF3Q9BXJ4 246 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PCBD2Q9H0N5 130 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CSTL1Q9H114 145 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 OR52A5Q9H2C5 316 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 OR51J1Q9H342 316 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CDCP1Q9H5V8 836 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PPP1R3EQ9H7J1 279 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 TLR8Q9NR97 1041 aaKnown RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 SMCO4Q9NRQ5 59 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 POT1Q9NUX5 634 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 CLEC5AQ9NY25 188 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 RBAKQ9NYW8 714 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 SERGEFQ9UGK8 458 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 IKZF3Q9UKT9 509 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 ZNF490Q9ULM2 529 aaPredicted RBP3.9□□□□□ -1.78
CD55-208ENST00000476590 DYRK1BQ9Y463 629 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 NPTNQ9Y639 398 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 TEX264Q9Y6I9 313 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 UNC79Q9P2D8 2635 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 PHIPQ8WWQ0 1821 aa3.9□□□□□ -1.78
CD55-208ENST00000476590 RREB1Q92766 1687 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CCDC187A0A096LP49 1063 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 LOC102723532A0A0G2JNH3 316 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TEX13DA0A0J9YY54 714 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 CBY3A6NI87 242 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 A6NIZ1 184 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 BBIP1A8MTZ0 92 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MYO1GB0I1T2 1018 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NPIPA7E9PJI5 369 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SGK494L7N484 410 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 AGRPO00253 132 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 UPK1AO00322 258 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 NME4O00746 187 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SLC16A3O15427 465 aaKnown RBP3.9□□□□□ -1.79
CD55-208ENST00000476590 RNF13O43567 381 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 TCF21O43680 179 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SLC28A2O43868 658 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SOX15O60248 233 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 DLX3O60479 287 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CYTIPO60759 359 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 DNAJB6O75190 326 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 CTAG2O75638 210 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 AQP8O94778 261 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 SERPINA1P01009 418 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 MT-ND4LP03901 98 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 EPHX1P07099 455 aa3.9□□□□□ -1.79
CD55-208ENST00000476590 ERCC1P07992 297 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms